Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi988g00007 ATGTGCAGCAAGCCACCTCACTCTCTCAGCAAACTTGAAAGGCAAAGGGGAGGAACAACCGAACAGGTCAGAGACGAAGCAGAGGCAGATCAAGAACGCGAACAGGATGAAGACGAAGTAGAGGCGGATCAAGAAGCAAACGCAGACGAAGAAGCAGACGCGATAGCCGGAGACCTGTTGTTCCCCAGTGAGGTTTACTCATATGATCCTGCAGATAATTTTGCTGTCAACTGTGGCTACTCCGGAAATGTCAACTTTCATAATCGGAACTGGATTGGCGACGTTAACGTTGACCCCAAACTGTTTTCTACCATTGAAGTTCAATCTGGACAACCATCTGTCAAATCCTATCCTCCTAATTCTCCTTCAGTTAGCCAAGTTCCATTCGGAACCGCACGTCTCTTTCACTCCAAATTCACCTACTCCTTTCCTGTCACTAACGGCCCAAAGTTCCTTCGCCTTCACTTTTATCCAACATCCTATCTCAACTTTGATCCCTACAACGCCCTCTTCTCTGTCATAGCAGGCAACCTTACCCTTCTCAAAGACTTCAACGCCTCACTTTGGGTTCACAAAGATGACAAGACAATCACCAAAGAATACTGTGTCAACGTGGAAACAGGTGAGAGGCTAAACGTAACTTTCCTTCCCAGCACCAATCACTCTGATGCTTATGCTTTTATCAACGGGATCGAGGTTGTGTCTATGCCTCCTTTCCTCTATTACACTAACACCAGTGACTTAGATTTTAAAGTTAAGCCTAAGCTGGTGGGTCATGATGGCACACCATTCCAAATTCAACACGACAAAGCTCTGGAGACACTTTACAGAGTCAATGTTGGCGATAATCAGGTTCCAGCGAGTAACGATACTGGCATGTTCCGGAATTGGGACAATGATTATCCACGCTACTTGGAGAAGCAATACCCATTCAGTGTATCAAGTGGCTTTGCAGTTCAAGTCAACTATAGAAATAATGTTATTCCAAATTACACTGCACCAGCCGTTGTATACTTAACTGCCCGAAGTTACGGACGGGATGAGACTGCGGATTATAATGTAACTTGGAATTTTGAAGTGGATTCACAGTTTAATTACATGATCAGGTTACATTTCTGCGAGTTTGACTTGCATATCCAGCGTGAGGGCGATAGAGTTTTCCAGATTTTTATAGCTGAGACTTTGGCTGAGCAATACGCTGATGTGATTTCCTGGAGTGGCGGTAACTTAGTTCCCGTTCATAAGGATTATGCAGTGATTATGAACACACAAGGAAGCTCTAACAGTGAGAAAGCCAATCTTTCCATCAAGCTGCAACGGCTGCCAGAGGGTATGGGAACCAAATACCGTGATGTAACATTGAATGGTATCGAAATTTTCAAAATAAGTGACGAAAATCACAATCTCGCAGGACCCAATCCCGAAGCCATTCTATCTCCACCATCGCAAAATCAATCATCCAAACAATCAAAGACCACCACAGTTATTGTTGCCGTGGTAGTCGCTGTTCCAGGCTTCATACTGGCATCTGTTATTGGCATCATAATTTTTCGGCGATGGAGAAGATCTCATGAAGGGTCCCAGAAGACAAAGACGGAAGGGTCATTTTTGCCATCTCATTTATGCCGCTACTTTACAATTGCGGAGATCAGAGCTGCCACAAACAATTTCGATGATGTTTTCATCATCGGGGTTGGAGGCTTTGGCAACGTGTACAAGGGTTACATTGACGGAACCACCCCCGTTGCGATTAAACGCCTCAAACCAGGTTCTCAACAAGGTGTCAACGAGTTCATGAACGAGATCGAGATGCTCTCTCAACTTCGCCATGTTCATCTGGTGTCCCTCATTGGTTACTGCAACGATGGTGGAGAGATGATCATCGTGTATGACTTCATGGCGCGTGGCACTCTCCGCGAGTATCTCTACCACTCTGATAACCAACCCCTTTCTTGGAAGCAGAGGCTTGCGATCTTATTGGGTGCAGCAAGAGGGCTGCATTATCTTCATGCAGGTGCGACGCACAATATCATTCACCGTGACGTGAAGAGCACGAACATCTTGTTGGATGAGAAATGGGTTGCCAAGGTCTCTGACTTTGGGTTATCGAAGGTGGGACCCACAGGGATGTCCGTCACCCACGTCAGCACTGTAGTGAAAGGCAGCCTTGGGTACTTGGACCCGGAATACTACAAGCGTCAAAGGTTGACTCTCAAGTCTGACGTGTACTCATTCGGTGTGGTGCTTCTTGAGGTGCTGTGTGGAAGGCCACCTTTTGTTCGAACCATGGATAAGAAGAAGGCGAATCTGGTTGATTGGGTTCGGAAGTGTTATGATAAAGGAGAGATTGAACAGACGGTGGATCCATTTATAAAGGATTCTGTTACAGTGGAGTGTTTGAAATGTTACAGCCAGATGGCGATGAGTTGCTTGCATGATGATGGGAATCAACGGCCCTCGATGAGTGATGTGGTTGGGGCATTGCAGTTTGCGTTGCAGTTGGTGGAGGGTGAAGAAGAAGATAACAAGTTTGGTGGGACCCAAGAAGACGGAAACAGTAAGGAAAGACTACTGTTCCCTCAGTTTATTATGAGTGATGAAGGGAGTGATGTGCGCTTCACTAGTACTGATGAATCCGGGACCCAGAGTAGCAAGGTGACCGTAGTCTCAGACAGTACTGAGGAACACCCTTCGGTCTCTGCTATTGTGTTTTCTGAGATTGGGAATCCAAGAGCACGATAG 2742 0.461 MCSKPPHSLSKLERQRGGTTEQVRDEAEADQEREQDEDEVEADQEANADEEADAIAGDLLFPSEVYSYDPADNFAVNCGYSGNVNFHNRNWIGDVNVDPKLFSTIEVQSGQPSVKSYPPNSPSVSQVPFGTARLFHSKFTYSFPVTNGPKFLRLHFYPTSYLNFDPYNALFSVIAGNLTLLKDFNASLWVHKDDKTITKEYCVNVETGERLNVTFLPSTNHSDAYAFINGIEVVSMPPFLYYTNTSDLDFKVKPKLVGHDGTPFQIQHDKALETLYRVNVGDNQVPASNDTGMFRNWDNDYPRYLEKQYPFSVSSGFAVQVNYRNNVIPNYTAPAVVYLTARSYGRDETADYNVTWNFEVDSQFNYMIRLHFCEFDLHIQREGDRVFQIFIAETLAEQYADVISWSGGNLVPVHKDYAVIMNTQGSSNSEKANLSIKLQRLPEGMGTKYRDVTLNGIEIFKISDENHNLAGPNPEAILSPPSQNQSSKQSKTTTVIVAVVVAVPGFILASVIGIIIFRRWRRSHEGSQKTKTEGSFLPSHLCRYFTIAEIRAATNNFDDVFIIGVGGFGNVYKGYIDGTTPVAIKRLKPGSQQGVNEFMNEIEMLSQLRHVHLVSLIGYCNDGGEMIIVYDFMARGTLREYLYHSDNQPLSWKQRLAILLGAARGLHYLHAGATHNIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPTGMSVTHVSTVVKGSLGYLDPEYYKRQRLTLKSDVYSFGVVLLEVLCGRPPFVRTMDKKKANLVDWVRKCYDKGEIEQTVDPFIKDSVTVECLKCYSQMAMSCLHDDGNQRPSMSDVVGALQFALQLVEGEEEDNKFGGTQEDGNSKERLLFPQFIMSDEGSDVRFTSTDESGTQSSKVTVVSDSTEEHPSVSAIVFSEIGNPRAR 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi988g00007 913 Pfam Protein tyrosine and serine/threonine kinase 563 826 IPR001245 GO:0004672|GO:0006468
Sebi988g00007 913 Gene3D Transferase(Phosphotransferase) domain 1 633 849 - -
Sebi988g00007 913 ProSitePatterns Protein kinases ATP-binding region signature. 563 585 IPR017441 GO:0005524
Sebi988g00007 913 MobiDBLite consensus disorder prediction 30 47 - -
Sebi988g00007 913 FunFam FERONIA receptor-like kinase 73 237 - -
Sebi988g00007 913 Coils Coil 26 53 - -
Sebi988g00007 913 MobiDBLite consensus disorder prediction 870 913 - -
Sebi988g00007 913 CDD STKc_IRAK 563 825 - -
Sebi988g00007 913 ProSiteProfiles Protein kinase domain profile. 557 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi988g00007 913 Gene3D - 270 463 - -
Sebi988g00007 913 Gene3D - 73 236 - -
Sebi988g00007 913 FunFam Receptor-like protein kinase FERONIA 633 850 - -
Sebi988g00007 913 SUPERFAMILY Protein kinase-like (PK-like) 531 830 IPR011009 -
Sebi988g00007 913 MobiDBLite consensus disorder prediction 1 47 - -
Sebi988g00007 913 MobiDBLite consensus disorder prediction 870 899 - -
Sebi988g00007 913 FunFam Receptor-like protein kinase FERONIA 529 632 - -
Sebi988g00007 913 PANTHER OS03G0124300 PROTEIN-RELATED 64 525 IPR046957 GO:0004672
Sebi988g00007 913 SMART serkin_6 557 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi988g00007 913 FunFam FERONIA receptor-like kinase 270 463 - -
Sebi988g00007 913 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Sebi988g00007 913 Pfam Malectin-like domain 76 462 IPR024788 -
Sebi988g00007 913 Gene3D Phosphorylase Kinase; domain 1 519 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi988g00007 Sebi-Chr988 142351 146484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi988g00007 68 913 Receptor kinase-like Gene Family AT3G51550 46.385 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi988g00007 Malectin_like 1e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi988g00007 - - mtr:25497555 986.867