Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi985g00011 ATGTCTTTGAAGGCTTCAACAAATTCCCGTATGAAGAAGCCTAGGTCGGAAATGAATGTTGATCCTGATGATCCAAAAACATGGTACATGCCTCGGTGGCAGTTTCTGGAGTATGATCCTCGAGTGGGATTTTGTAAAGTTGCTGCTCAGTTTGCCAGGGACTTTTGGGACATTGTTCCTAGGCAGGTTCATTTTATTGACGGCATTGGAAACAATATCAATGTTGTTGTGCGAAGAGATGTTGACGACATGTACTTTACTCATGGTTGGCCTTTGCTGAAAGATGTTTATGATCTTGATGATGGAGGCTGGATTAAGCTTTTTTATCATGATAAAGATGTTTTCAAGATTTTTGTGTTTGATAGGGATTTTATTCATGTTCATTTGCCTATTCCACCAAAAGAATATGAACATACTGTCACTTATATCCCGGAGGATATTATTCCTGGATATCGTGAAAGTGATTTTGCTGATGTGCACTATTTTGATAAAACAATGACTAAAATGCATGCTAATGGTAGAACACTGAACCTTCCAACTGCCCTTTGTGAAAGATTTAGAACAAAGATAACCTCTGCTGTGTTGAGGGATGATAATGGTGTTGTCTTTCCTGTCAATCTGTCTTGGTCAAGGAATGGAAAGGTTGCATATATCACAAAGGGATGGAAACAATTTAGTATGCAAAAGAATTTGAAGAAGGATTCAGTG 708 0.3828 MSLKASTNSRMKKPRSEMNVDPDDPKTWYMPRWQFLEYDPRVGFCKVAAQFARDFWDIVPRQVHFIDGIGNNINVVVRRDVDDMYFTHGWPLLKDVYDLDDGGWIKLFYHDKDVFKIFVFDRDFIHVHLPIPPKEYEHTVTYIPEDIIPGYRESDFADVHYFDKTMTKMHANGRTLNLPTALCERFRTKITSAVLRDDNGVVFPVNLSWSRNGKVAYITKGWKQFSMQKNLKKDSV 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi985g00011 236 Gene3D - 152 236 IPR015300 -
Sebi985g00011 236 SUPERFAMILY DNA-binding pseudobarrel domain 43 123 IPR015300 -
Sebi985g00011 236 SUPERFAMILY DNA-binding pseudobarrel domain 158 234 IPR015300 -
Sebi985g00011 236 MobiDBLite consensus disorder prediction 1 22 - -
Sebi985g00011 236 CDD B3_DNA 160 232 IPR003340 GO:0003677
Sebi985g00011 236 Pfam B3 DNA binding domain 162 233 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi985g00011 Sebi-Chr985 155318 156206 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi985g00011 B3 3.1e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi985g00011 - K03497 tpra:123886137 53.9138