Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi985g00002 ATGTCATCCGTATCACCCACTCAAGATCTTTCTACTGACCCGAGTTCAGAGTCCGGAAACACCTCCTCTAGTTCATTTTCTTCTTTGCTAGGAGATAACCCCACTCTTAATACTAACCAGGCTCCCATAGTAAACATACCTGATTCAGAGGAAACAGAGAGCGACTCTGAGGACTTGTCGGAAGGGGGAAGAAATATCCCTCCTCCTAAGGTTTATAATACCTTCCTAACCGAGACCTATAACAACAATTCGGAGTACACCTCCTTTTCTAGCATAGAGCGATTCCGCAAGTCGACCCCAGTTGCTAACCTTACAGTAGAACCATCTATAGTCATCGACCCATGTCATAAGGAGGAACTAATTTGCCTGAGTAGCCCGGATCAAGGATCCTCGGTCCCCTTCACCTATATTATCCCTCATAAAGGCATCCTGAGTGCCTATACCTCCTCTTTTAAAAAGTGGAAACAAAAGTTTTTCAAGATTCGGGTTTCCGGGGTAATGTCCGATCTCCTAGTGGGAGAGGACGGGAACCCCTATTTTCCTCTTTTCTGGTCTTTGGAACCGAGAAGGGTTCCTGTAGTTAAGTTCGACAAGTTACCCTTTGACAAAAAAATAGACGTAGCCTTCCTCCAAAACCAAGCCCCTATTGACTGTGGCTTTCTGTTGGAAAACGAGGATCTGCCAGCTCGGCTGCGCCAGTCTTTGGATAAGATGCCTCCCAAAACATCGGTTCCCCAAGTCATCACCAACGAAAAGGCCCTGAGGCGCTGGTTGAAAAAGGTCGGGGTTGATCCTAATGCTCCCGGCTCCGAGAATCAGACCACCGCTTCTGCCAACGAGAGGAGAAAAAAGCAAAAGTTGGATACTCCAAGGGATAATCAACAACAACGAACAGAAACTAAAGCTATGGGAACCAATCTTGATGTTCCTCCTGCTAAGACAACTGAGGGTGAAGGATTGACTTCCGATCGCTCCATGCCCTCCTCTGCGAGTCATCCTCAAGGAAATCGTCCATCACCTAAGCCTCAAACCTGCGGGTATACACAAAACCAAACTCCCGTGCATACCTCCTCTGAACCTCAGGGTTCCATGACTTCTATTCCGGCGGATAAATGGTGGTACTTGTTCAACAATTTCCAGGGTGCTGAGGGTAGTGACATTACTTCCATCTTTGATCATCGCTTTCCCGTTGAGCAAGTGGTAGGTCGTGAATTTAACAAGAGGGAGGACATAGCTCGGGTCAACAAAGTGGGTATGCGCAATGTGGGCAAGCACTTGATGACCATGGGAATGCAGACTTCATTCTTTGGTTGCTGCTTTGACAGTGCCATGAATTCTGTTGATAAGGAGATGAAAGATCGGGCTCTGAAGATTCAAGATTTAACTGCTAAGTTGCAGGCTACGGAGTCGGCAACTCAGACTATTGCCTCTTTAGAGAAGTCTCTTCTAGAGGCGAAAACCAAATTGGCCACTGCTGAATCTGAGAAGACAGCTATTAGTACAAAATGTTTAGAGTTTGAGACTAAGTACTCAGATGCTTTTGCCGAACAAGTCAAGTTGAAGAAGGACTTTGATGATGTTGTGGCCGCGAAGGTTAAATTATCTCAGGATCTTTCTGATGCTTCTGAGCAGAACAAACAGCTCGCCAATAACCTTGAAGCCCTGCAAAAAGAGGTTGCTATTTTGCATGCACAAGGCTTCCATAAGGCGATTGAACAAGTGAAGTTGTTGAACCTTGAGGTCAATGTGGAAGGGGTGGGGGTTTTCAAGAAAATTGTGGATGGGAAACTAGTAGAAGAATCTGAAGACGATGAAGACCTCAATCACGACAGCGCCGCCGTGGGTGAGAACCTTCTCCCACAGCCGCGAACCACCACGTCTCCAGCCTTCCCCAGCGCCGCCGTGGGTGGCTCCCCTCTCTTCACAGATGCGACCCTTGCTGTGAAGAACATCACTTCCTCCGTTCTCCCGCGCGACCGATTTCACTTCCTCTTGTTCCCCTTTGCGCACGTCGAAGAACCCCAATCGTTTGAAGACGAAGAACCCAGATTGTTCCCCCTTTGCGCATCAAAGAACCCCAATCGTTTGACGACGAAGAACCCATGTGCTGTTCTCCACTGTCGTGCGCTGTTCTCCACCAAGGACCCACATTCTGGTGATGTGCCTAGAGTAAATGGACAACTGGCTGTTTCTCGTGCATTTGGAGACAAGAGTCTCAAGTCACATTTGAGATCAGACCCTGATGTTCAGCATACCGACATAGATGCTGATATTGATATTCTAATCCTTGCAAGTGATGGACTTTGGAAGGTAATGGCTAATCAAGAGGCAGTGGAAATTACTACAAAACTGAAGCATTGTACCTCTGCCTCAGTCCATCCATGGCATGGACAAGTACCAATTCCCTATTTTGGTCCACCTCTATCTCCTTTGCAGGTTTCCTCACCTGGTTCTATCCAGCCCGGAGAGACTCAGTCTGGTACTTCGCAGCACCCTATCATCACATATCGACGAAGAACACAACAAGTTCTTCCACCAACAGAAGACATAATAGAAGATCCTAGTGATTCATGTCCACCTCCAACGGCTTCTCCTATCACGACCCTGCCAAAGAAAAACTTGCTGAAAATCAAACCTCAAGGGAAAATTCTGTGA 2655 0.4719 MSSVSPTQDLSTDPSSESGNTSSSSFSSLLGDNPTLNTNQAPIVNIPDSEETESDSEDLSEGGRNIPPPKVYNTFLTETYNNNSEYTSFSSIERFRKSTPVANLTVEPSIVIDPCHKEELICLSSPDQGSSVPFTYIIPHKGILSAYTSSFKKWKQKFFKIRVSGVMSDLLVGEDGNPYFPLFWSLEPRRVPVVKFDKLPFDKKIDVAFLQNQAPIDCGFLLENEDLPARLRQSLDKMPPKTSVPQVITNEKALRRWLKKVGVDPNAPGSENQTTASANERRKKQKLDTPRDNQQQRTETKAMGTNLDVPPAKTTEGEGLTSDRSMPSSASHPQGNRPSPKPQTCGYTQNQTPVHTSSEPQGSMTSIPADKWWYLFNNFQGAEGSDITSIFDHRFPVEQVVGREFNKREDIARVNKVGMRNVGKHLMTMGMQTSFFGCCFDSAMNSVDKEMKDRALKIQDLTAKLQATESATQTIASLEKSLLEAKTKLATAESEKTAISTKCLEFETKYSDAFAEQVKLKKDFDDVVAAKVKLSQDLSDASEQNKQLANNLEALQKEVAILHAQGFHKAIEQVKLLNLEVNVEGVGVFKKIVDGKLVEESEDDEDLNHDSAAVGENLLPQPRTTTSPAFPSAAVGGSPLFTDATLAVKNITSSVLPRDRFHFLLFPFAHVEEPQSFEDEEPRLFPLCASKNPNRLTTKNPCAVLHCRALFSTKDPHSGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQHTDIDADIDILILASDGLWKVMANQEAVEITTKLKHCTSASVHPWHGQVPIPYFGPPLSPLQVSSPGSIQPGETQSGTSQHPIITYRRRTQQVLPPTEDIIEDPSDSCPPPTASPITTLPKKNLLKIKPQGKIL 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi985g00002 884 SUPERFAMILY PP2C-like 721 783 IPR036457 -
Sebi985g00002 884 Coils Coil 475 495 - -
Sebi985g00002 884 MobiDBLite consensus disorder prediction 277 295 - -
Sebi985g00002 884 MobiDBLite consensus disorder prediction 848 868 - -
Sebi985g00002 884 MobiDBLite consensus disorder prediction 1 49 - -
Sebi985g00002 884 Coils Coil 531 565 - -
Sebi985g00002 884 ProSiteProfiles PPM-type phosphatase domain profile. 392 884 IPR001932 -
Sebi985g00002 884 MobiDBLite consensus disorder prediction 814 835 - -
Sebi985g00002 884 MobiDBLite consensus disorder prediction 260 364 - -
Sebi985g00002 884 Pfam Protein phosphatase 2C 721 782 IPR001932 -
Sebi985g00002 884 Gene3D - 687 795 IPR036457 -
Sebi985g00002 884 MobiDBLite consensus disorder prediction 1 71 - -
Sebi985g00002 884 SMART PP2C_4 501 788 IPR001932 -
Sebi985g00002 884 MobiDBLite consensus disorder prediction 318 364 - -
Sebi985g00002 884 PANTHER PROTEIN PHOSPHATASE 721 784 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi985g00002 Sebi-Chr985 49970 58171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi985g00002 719 785 PP2C-type Phosphatase Gene Family AT1G22280 65.672 1.45e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi985g00002 K17506 - cpap:110816761 114.005