Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi982g00008 ATGGAGCCAGATTCTGAAGTGCTGCAGAAGAGTTCAGTAGAGGAAGAGCTTAAACCTGCTAGCACTGCTGATGTTAAAATGCAGGAAAGAGATCAGAAATATATAAAAATGTGGCAATTGATGTATAAGCATGCAGTATTAAGCAACGCGGGGAAAAGTGAAAACAAGGTGCCCTTGGATGGAAAGGACAAGGAAGAAAAAGAGAAAGATGCTATTGAATTTAATGTAGGAGATAGCTCTTCTTGTGATAATTATTGTGAAACAGATCAGGATATGGATGATGAAAATAAGAATGTAATTGAGCTGGCTCAAATGAGGTACTCCCAGAAAAGAGTGAAAGTACCAGAGAAGACAGGAATGCCTCAACATCCACTGAATCTCCTAAGGAAGCACAGAGGATGGGGACTACACCTGACCGAAGAACACCAAAAAGCTGGAGCAATCTGCAAGAAGTTACTCCTCTTGAAAAGGTTTGTAAAGGCATTTAGAGAAGTTCTGCCATTTCAAGATGCTGAAAATGGTTCACAGACTTCTGCAACAGTGGAACCTCAAACTAATCCAATTCAATGCCTTGATGATTCCTCAGGCCAGAGCAAAGAAGAAACAGACAAAGGAAGGGATTATGGTTATTCTGCTAAGATATTGCTTAGAAAAGCATTGTCCTCTCATAATAGTACTATGGAATTTTCAGATAATGCTGGTGATAATCCAATGCCTGAACTGCACAGTCCTATTGTGCTCAAAGAAAGATATCTTGAGCATCCTGAGACCAAGACACCAAAGGATATGCCTGCATCTGGAGCCATTGAAGATGATTTGAATGGAACCAAAGTTCAGCCGACGGTTATGATAATGGGGAGAAGATCTCAATTGACAATGATAATATTTATCATTTCCTGGAGATTGATATCAAATTTGAATACAGAAAACCCAAATATCAAATCTGAGTCAACTGAAAGAGATTTTGAATCCAAGAATGTGATTGGTGATGATAGGGAGGAACTTTCTACGTCGAAAAGTTTACTCCTAAATGGTCTTGTCAGATCACTCAGATCTAATTTGGTTGGTTCAGGAGCACCTTCAAACCTATTAGATGAATCAACAGTGGACAGAACAGAAAGGACTGAAAAAGCTAAGCTGGAAACTGAGACTCCTGAAGAGATACCTACACACCAACAATCTGAAACTCCTAAAAGTGCTGTTGTAGGACCTGAGACCCAGCCAGAGAAACAGAGCTATGCAGGACTGTGGTTCATGGTGTACAAGCACATGGTATCAGATCTGGCTGAAAACAATTCCAAGTCACTTAATGATGGGGCAGATGAGAAAGAGTCAGGGTATGAAGGCAGCAGAACAAGAGGAAGTTCCATCACTTATGAAAGTACACATGTGATTGATCAAGATCATGCTGTAACTGACCCAGAAGTTGAACTCCACAAGATTGAAGCCATCAAGATGGTAGAAGAAGCAATTGATTCAATCCTTCCGGATGATCAGGACCATTTACCAGACAGGCAGTCACTCACTCAGAACTCAATTTTAGACAATTCAGAACAATCCAGCAGGACTGAGAGAATGTACAGTGAAGGTCTGAACCAAAAAGAAGAAAGGATGGAATCTGGAAATGGAATAACTCAAGACGAAAAACAAGAACCGGCACCAAAGGAGGGAAACAAACCAAACCATCAACTGTCTAGAAGCTGGAGCAATCTTAGAAAGGTTATCCTGCTTAGGAGATTCATCAAGGCATTAGAAAAAGTAAGGAAATTCAACCCAAGAGGGCCAAGATATCTACCTATAGAGCCTGATTCAGAAGCTGAAAAAGTTAATTTAAGGCACCAAGACATGGAAGAAAGAAAAGGAACAGAAGAATGGATGCTTGATTATGCACTTCGACAGGTTGTTTCCAAATTAACCCCTGCAAGGAAAAGAAAAGTGGAGCTGCTAGTGGAAGCTTTTGAAACAGTCATACCAACCATAAGAAATTGA 1989 0.4032 MEPDSEVLQKSSVEEELKPASTADVKMQERDQKYIKMWQLMYKHAVLSNAGKSENKVPLDGKDKEEKEKDAIEFNVGDSSSCDNYCETDQDMDDENKNVIELAQMRYSQKRVKVPEKTGMPQHPLNLLRKHRGWGLHLTEEHQKAGAICKKLLLLKRFVKAFREVLPFQDAENGSQTSATVEPQTNPIQCLDDSSGQSKEETDKGRDYGYSAKILLRKALSSHNSTMEFSDNAGDNPMPELHSPIVLKERYLEHPETKTPKDMPASGAIEDDLNGTKVQPTVMIMGRRSQLTMIIFIISWRLISNLNTENPNIKSESTERDFESKNVIGDDREELSTSKSLLLNGLVRSLRSNLVGSGAPSNLLDESTVDRTERTEKAKLETETPEEIPTHQQSETPKSAVVGPETQPEKQSYAGLWFMVYKHMVSDLAENNSKSLNDGADEKESGYEGSRTRGSSITYESTHVIDQDHAVTDPEVELHKIEAIKMVEEAIDSILPDDQDHLPDRQSLTQNSILDNSEQSSRTERMYSEGLNQKEERMESGNGITQDEKQEPAPKEGNKPNHQLSRSWSNLRKVILLRRFIKALEKVRKFNPRGPRYLPIEPDSEAEKVNLRHQDMEERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVIPTIRN 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi982g00008 662 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 6 105 IPR044681 GO:0005516
Sebi982g00008 662 MobiDBLite consensus disorder prediction 505 527 - -
Sebi982g00008 662 MobiDBLite consensus disorder prediction 1 26 - -
Sebi982g00008 662 SMART CaM_binding_2 534 658 IPR012417 GO:0005516
Sebi982g00008 662 MobiDBLite consensus disorder prediction 357 408 - -
Sebi982g00008 662 Pfam Plant calmodulin-binding domain 555 658 IPR012417 GO:0005516
Sebi982g00008 662 MobiDBLite consensus disorder prediction 496 564 - -
Sebi982g00008 662 MobiDBLite consensus disorder prediction 367 388 - -
Sebi982g00008 662 MobiDBLite consensus disorder prediction 172 205 - -
Sebi982g00008 662 MobiDBLite consensus disorder prediction 528 556 - -
Sebi982g00008 662 MobiDBLite consensus disorder prediction 431 459 - -
Sebi982g00008 662 MobiDBLite consensus disorder prediction 172 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi982g00008 Sebi-Chr982 107079 109462 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi982g00008 468 659 Calmodulin-binding Proteins AT5G04020 44.041 4.21e-34 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi982g00008 - - aprc:113861458 618.616