Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi981g00007 ATGGCGACGAAGGCAACGAATGCATCTGATTTTGGAAGGGACTGTTCTGAGGAGGACAAGGTAGCATTTAAAGAAGGGTTGAATAGAGTCATCTCACTCTCTGATAGCATGATTCAGTTCATGAAGGGTGTGGAGCATCGACTAAACAAAATGGATGATCGCATTACTGAGTTGTTAGCAAGAGTTGACAAGTTTAATTTGAATCTTGATACAGTTGTCACTGTCACTAAAAATATCAACTCTGAAATAGCAAAGTCCACTAAGACTGAATGCTCCACAAAAATGGATCAAAATATTGGGTCCATTCATCCACCTGAGCCTGAACCCATCAACATCATTTTTGATGTATCAGACGAGGAAGAGGGAGACGAGATGGACGTTGATCCCACAAACGATGAGGTTCGTGATGTCACAGGAACGAAGAAAATTAGGTCTCCTATTGAAGGCCAGTGTAGCAAAGATGAGACTACATCCCAAAGGAAAGGCAGATCAACACGTAGCAATTATGTCCGTCGTTGTAGGGGTTCCACAGTTAACGACTCAAAGCTCTCCGGGAAGAAGTTATTCCAAACCCCTACTTCAAAGTCCCCTGGTAAAGGCTCGAAGAGATGCAAACCACATAACGGTCCTACTAACCCAGAAAATGAAACTTCACAGACCCATACACCAGACATAAACAAGGATGGTTTGGAAGAAAGGACCATAAAGACTCCATCATCAAATATCTTACCGAAGACAATGTTTTCAAGGTTAAGGCCATCAAATGACATGAAACTCACTGAAAGGGAACTTAAGATTGTTGCATACATCTTTTCATACGATGGAGACGAGGATGGCATATTGGATGATGTTCTTGGAGGTTGCACAACCGATGAGTTGATTTCAAAATATGCTAGAGTGTGGATGCAGCCCTATCCTGAACTTAAATATATCTACGTTCCCGTAAAAGATTCTACCGAGCACTGGTTTTTTATGGTAATTTCATTGGAGGAACAATTAATTTATTTCCTGGACTCGTACCTCCGGTGTGAAGATATTAGGAGGAATACTATTCGGAATGTGTCCTCAATCAAAATTGCAAAAAAATTGATTTCAAATTTACCAACAGAGTTACCAAAGGAGGTGACTTTAAGCGATCCGGTTGGAAATGAATTTTCTGTTTCCATTGAGGAGTTATCCAACAACCACTGCTTCACAAAGGGTTTGCCACAGATGAGGGCTTTTTACCATGTTCATTATCCAGTACACATGTGGTACAGATACGTTGGAAATGCTACATTCAGCTTTGAACTATGGCCTAAAGATGGAGAAGGCCAGATTGATTATCCTAATCCTGCTTTAAAAAAGGAAGATCGTGAACAATGTGTCAACCAACCTGGGACAACATCAAATAGTGATGGCGAAGATGTAAGTAGTGAAGTAGATGAAATCATGGGAGTTCGCGGTGAAGACCTATGGACGACTACACTTACTCAAGCACAGGTGGAAGGTGGGCGGGCAGTGGTTATACCGGCGAGGGTCGTGACCACTTACTTCCACAACAGGCCAAAGAACTTCCAAGTTAGATTACCAGAAGACCATGTCAAATCGTGGGAATTGATTTGGAATCGACGAATACCGACAGAGTGCAAAATTGGACATGGTTGGAGTGAATTTTGTACCACACATGGGCTGCAAAAAGGAGACCACATCAGGTTTTGGAAGTTGGAAAATGGAGGCTTCATCAGAATCGTTCGAACAAGATCCTCAACTTAG 1755 0.4194 MATKATNASDFGRDCSEEDKVAFKEGLNRVISLSDSMIQFMKGVEHRLNKMDDRITELLARVDKFNLNLDTVVTVTKNINSEIAKSTKTECSTKMDQNIGSIHPPEPEPINIIFDVSDEEEGDEMDVDPTNDEVRDVTGTKKIRSPIEGQCSKDETTSQRKGRSTRSNYVRRCRGSTVNDSKLSGKKLFQTPTSKSPGKGSKRCKPHNGPTNPENETSQTHTPDINKDGLEERTIKTPSSNILPKTMFSRLRPSNDMKLTERELKIVAYIFSYDGDEDGILDDVLGGCTTDELISKYARVWMQPYPELKYIYVPVKDSTEHWFFMVISLEEQLIYFLDSYLRCEDIRRNTIRNVSSIKIAKKLISNLPTELPKEVTLSDPVGNEFSVSIEELSNNHCFTKGLPQMRAFYHVHYPVHMWYRYVGNATFSFELWPKDGEGQIDYPNPALKKEDREQCVNQPGTTSNSDGEDVSSEVDEIMGVRGEDLWTTTLTQAQVEGGRAVVIPARVVTTYFHNRPKNFQVRLPEDHVKSWELIWNRRIPTECKIGHGWSEFCTTHGLQKGDHIRFWKLENGGFIRIVRTRSST 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi981g00007 584 Gene3D Adenoviral Proteinase; Chain A 237 408 - -
Sebi981g00007 584 Gene3D - 472 581 IPR015300 -
Sebi981g00007 584 ProSiteProfiles B3 DNA-binding domain profile. 486 583 IPR003340 GO:0003677
Sebi981g00007 584 CDD B3_DNA 487 573 IPR003340 GO:0003677
Sebi981g00007 584 SUPERFAMILY DNA-binding pseudobarrel domain 486 581 IPR015300 -
Sebi981g00007 584 Pfam Ulp1 protease family, C-terminal catalytic domain 304 349 IPR003653 GO:0006508|GO:0008234
Sebi981g00007 584 MobiDBLite consensus disorder prediction 120 234 - -
Sebi981g00007 584 MobiDBLite consensus disorder prediction 90 109 - -
Sebi981g00007 584 SUPERFAMILY Cysteine proteinases 292 354 IPR038765 -
Sebi981g00007 584 Pfam B3 DNA binding domain 487 573 IPR003340 GO:0003677
Sebi981g00007 584 MobiDBLite consensus disorder prediction 208 224 - -
Sebi981g00007 584 MobiDBLite consensus disorder prediction 169 198 - -
Sebi981g00007 584 Coils Coil 41 68 - -
Sebi981g00007 584 SMART B3_2 486 581 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi981g00007 Sebi-Chr981 107835 112584 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi981g00007 B3 1.7e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi981g00007 - K14572 mtr:11415504 83.1889