Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi981g00006 ATGGAAAACATTAATGATAACGTTGGTGAGAATGTTGTTGGGTTGGAAGAAATTGAAAGTGAAGATGATGGTGACAATGCATTTCATTACGACTCTCGTGAATTTGTAATTGGGGTGGATTCTGAGGCTGATTTTGTTGACCTTAATCCTGACTTGTTAACTGAGGATAACATGAGGAATTTTAATTTTCCTAATTTGGATGTTTCTTATAATTTTTATAATACTTGGTATGGAAAAATGAAGGGGTTCTCAGCACGAAAGGGCAAAGAACGTAAAAATGCAATGGAAGAAATTATTGAGAAGACGTATCTATGCCATAGGGAAGGAAAGATACCAATTAATACGAATGAAAAGATGGGGAAGAAAAAACGTGAAGCAAAGCCTGAGACAAGGTGTTTATGTCCTGCAAAAATGAAGGTTAGGTTAGATGTACATTCTGGCCGTTGGAACGTGACCAAGTTTTGTGATGCCCATAATCATGAAATGCTAAACCCCAAATACACAGGGATGCTACCGGATCATAGGAAATTGAGTGAAGCCGATATCTTGGAGATGAATAACATGCGGAATGCAGGTATTACTACACCTCAAATTTATGGGTCATTTTCCAGCCAATCTGGTGGGTACAACAATGTTGGTTTTCGGAAAAGAGATCTTTACAATGAGATTGGTAGGCAAAGAATGTTACAGCTAAGTGATGCTAAGGGTGCAATTAAGTACCTACGTGAAAGGGAGCAGAATGAAGGGTCAATGTTTTGGAGGCACACGACTGACTCTGAAGGCCGACTCCAGCGATTATTTTGGTGTGACGGTCAGTGCCAAGTTGATTACAAATTATTTGGTGATGTCCTTGCCTTTGATGCCACACACCATGAAACTGAGGAAACTTATGTGTGGGTTTTGGAACAGTTGATGGTGGCAATGAAAGGTAAGATGCCTTCAGCAGTGATAACAGATGGTGACCTTACTATGCGGAATGCTATCAAAAGAGTGCTTCCTAATGCACACCATAGGCTTTGTGCATGGCACCTATGTCGTAATGCTGCCAGTAATGTTAAAAATCCTAAGATGGTTTCGATGTTTAGGAAATGTATGTTGGGTGACTATGAGGTGTCTGAGTTTAAACATAGGTGGGAGGTAATGGTGAAGGAATTTCGACTTGAGGAAAACAATTGGGTGAAGGAAATGTATGAGAAAAAGAGGATGTGGGCCACAACATACATAGGGGGAAATTTCTTTGTAGGGTTTAGGAAAACGTCTCGATGCGAGGGGCTGCATGGGCAACTTGGAAAGTTTGTTCACTCTCGGACCGATTTGGTTGGATTTCTGAAAAATTATGGTCGTTTTCTTGAAGTACTAAGGTATAATGAGTTAGAAGTTGATTTTGAGTCAGTACGTGGTGATATGGTCCTTGAGACTAACTTGCATGCACTAGAGAGATCAACCTCTAAGATTTTCACAAAGGAGGTTTTCATATTGGTACGTCCCGCCCTTGCTAGGGGAAGCACTATGAGGGTCATGGGCTGTACACAACTGATGTCACAAACCATTTTTACAGTGACCAAGTATGGTAGATCACAAAAGGAGTGGCAAGTGTCATATATTCCAGAACCACTGTTCCTTAAATGTTCTTGTCAAAGAATGGAATCTTTTGGACTTCCATGTGATCACATAATCGGTGTGATGGTACACTTGAACATACAAGAGATGCCGAAATGTCTTGTGCCGAGTAGGTGGACCATGGGTGTGAAGGATAGTGCTTATGAAATTAGGGATGGACGCAACTCGATTTGGGATTCTGTGTTCGATGCACGTTGTGGTTATTTGGACTTTTTGTGTAAGAAGATGAATAGATTGGGGGGTAGATCTGCTACAACATTCAATGAGATTAAGGACTGGGTTAGCAGTAAAATAAACTTGTATAGTGAAGCACATATGAATAGTGGTCATGGGAATGAAAATGGTACAGATGAAGGTGGTCCAACATTGAAAGATCCAATTAGAGTTGCTTCAAAGGGGTGTGCAGCTGGTTCATCGTCACAATCAAGAAGACGACCTCATAAATGTAGGCAATGTGGTGTTGCTGGTCACAATCGAACTACTTTTCCAAATAAAAGGAAATATGAGGCGTCTATTGAGTCGGGAGAGTGTGAAGGTGAAGTGAGCCATGGTTAA 2175 0.4083 MENINDNVGENVVGLEEIESEDDGDNAFHYDSREFVIGVDSEADFVDLNPDLLTEDNMRNFNFPNLDVSYNFYNTWYGKMKGFSARKGKERKNAMEEIIEKTYLCHREGKIPINTNEKMGKKKREAKPETRCLCPAKMKVRLDVHSGRWNVTKFCDAHNHEMLNPKYTGMLPDHRKLSEADILEMNNMRNAGITTPQIYGSFSSQSGGYNNVGFRKRDLYNEIGRQRMLQLSDAKGAIKYLREREQNEGSMFWRHTTDSEGRLQRLFWCDGQCQVDYKLFGDVLAFDATHHETEETYVWVLEQLMVAMKGKMPSAVITDGDLTMRNAIKRVLPNAHHRLCAWHLCRNAASNVKNPKMVSMFRKCMLGDYEVSEFKHRWEVMVKEFRLEENNWVKEMYEKKRMWATTYIGGNFFVGFRKTSRCEGLHGQLGKFVHSRTDLVGFLKNYGRFLEVLRYNELEVDFESVRGDMVLETNLHALERSTSKIFTKEVFILVRPALARGSTMRVMGCTQLMSQTIFTVTKYGRSQKEWQVSYIPEPLFLKCSCQRMESFGLPCDHIIGVMVHLNIQEMPKCLVPSRWTMGVKDSAYEIRDGRNSIWDSVFDARCGYLDFLCKKMNRLGGRSATTFNEIKDWVSSKINLYSEAHMNSGHGNENGTDEGGPTLKDPIRVASKGCAAGSSSQSRRRPHKCRQCGVAGHNRTTFPNKRKYEASIESGECEGEVSHG 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi981g00006 724 MobiDBLite consensus disorder prediction 702 724 - -
Sebi981g00006 724 ProSiteProfiles Zinc finger SWIM-type profile. 518 566 IPR007527 GO:0008270
Sebi981g00006 724 MobiDBLite consensus disorder prediction 674 724 - -
Sebi981g00006 724 Pfam MULE transposase domain 286 347 IPR018289 -
Sebi981g00006 724 Pfam FAR1 DNA-binding domain 71 163 IPR004330 -
Sebi981g00006 724 PANTHER OS01G0519700 PROTEIN 57 600 - -
Sebi981g00006 724 SMART 26again6 541 568 IPR006564 GO:0008270
Sebi981g00006 724 Pfam SWIM zinc finger 533 566 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi981g00006 Sebi-Chr981 104774 107136 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi981g00006 FAR1 5.2e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi981g00006 - - tpra:123913749 633.639