Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi97g00023 ATGGCACAGTTACCTCCTAAAATACCAACCATACCCCAAAATTGGCCATCTTTTCCTCACCAAAGGCCATCCACAATGGCAAACTTTTCCCCTAACACCACCGCCACATCTACCACCGTAACCGCAACATCACAACAACCGTCATGGGTTGACGAGTTCCTCGACTTCTCCTCGGCACGGCGGGGGGCTCACCGGCGCTCCGCCAGTGACTCCATTGCCTTCCTTGAATCGCCTTTCCTCGAAGAATGCCGAAGCGACGGCGGCGGATTCGACAGGCTGGATGACGACCAGCTCATTTCCATGTTCTCCGATGAAGTCGGCCGCCGTCTCACTTCCGCCGCCGCCGCTGTCGTTCCACTTCCAATCCGTCCTCGCCGTCCTCCGACCAAAACAGCAAACAACAACGACGAAGAAGCCTATGGCAATGGCCCTAAGAATGAAGCTGTTGAAGAAGAAAGCACGTGCATGAATGAGGCCGCTGCGGCGGCGCCATCCTCCGCTGCCACCACCACCACCTGCACTGAAACCGTTGTCGATCCCAAGAGGGTCAAAAGAATTTTGGCTAACCGGCAATCAGCTCAGAGGTCAAGAGTGAGAAAGCTACAATACATTTCTGAGCTTGAAAGGAGCGTAACAACTTTGCAGACGGAGGTTTCAGCATTGTCACCAAGAGTTGCATTCTTGGACCATCAACGTTTGATTCTTAACGTCGACAATAGTGCCTTGAAGCAACGGATTGCTGCTTTGGCCCAGGACAAGATTTTCAAAGACGCTCACCAAGAAGCATTAAAGAAGGAAATAGAAAGACTGAGGCAGATCTATCACCAACAAAACCTGCAGAAGATGGGAAACACAGTCAACAACAATGGCCATTCTCTTCAATCACCACCAACATCACAGCCACAACCACATTCTCTCCATCAGCAGCTAACAGCCTCACAACCTTTGGTATTCAAGGACAAGGAGCAGCTCCTCAGTTGA 981 0.5138 MAQLPPKIPTIPQNWPSFPHQRPSTMANFSPNTTATSTTVTATSQQPSWVDEFLDFSSARRGAHRRSASDSIAFLESPFLEECRSDGGGFDRLDDDQLISMFSDEVGRRLTSAAAAVVPLPIRPRRPPTKTANNNDEEAYGNGPKNEAVEEESTCMNEAAAAAPSSAATTTTCTETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQNLQKMGNTVNNNGHSLQSPPTSQPQPHSLHQQLTASQPLVFKDKEQLLS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi97g00023 326 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 179 231 IPR004827 GO:0003700|GO:0006355
Sebi97g00023 326 PANTHER BASIC LEUCINE ZIPPER 34 1 302 - -
Sebi97g00023 326 MobiDBLite consensus disorder prediction 282 316 - -
Sebi97g00023 326 SUPERFAMILY Leucine zipper domain 181 235 IPR046347 GO:0003700|GO:0006355
Sebi97g00023 326 MobiDBLite consensus disorder prediction 282 326 - -
Sebi97g00023 326 SMART brlzneu 177 241 IPR004827 GO:0003700|GO:0006355
Sebi97g00023 326 MobiDBLite consensus disorder prediction 14 35 - -
Sebi97g00023 326 CDD bZIP_plant_RF2 182 232 IPR044759 GO:0003700|GO:0006355
Sebi97g00023 326 Coils Coil 260 280 - -
Sebi97g00023 326 Gene3D - 180 253 - -
Sebi97g00023 326 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 184 199 IPR004827 GO:0003700|GO:0006355
Sebi97g00023 326 FunFam Basic leucine zipper 61 180 253 - -
Sebi97g00023 326 MobiDBLite consensus disorder prediction 122 145 - -
Sebi97g00023 326 MobiDBLite consensus disorder prediction 1 35 - -
Sebi97g00023 326 Pfam bZIP transcription factor 181 226 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi97g00023 Sebi-Chr97 782976 785332 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi97g00023 1 258 bZIP Transcription Factor Family AT2G42380 51.986 1.75e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi97g00023 bZIP_1 8.8e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi97g00023 - - gmx:100820197 381.719