Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi979g00001 ATGTACAGTCTCACACTTGATGAGGTTCAGAGTCAATTAGGTGATTTAGGGAAGCCGCTAAGTAGTATGAATCTCGATGAGCTTTTAAAAAATGTATGGACTGTTGAGACAAGCCAGTCCATGGTTATGGACAATGAGGGCACAGCACAGGCTAGTCAAGCTGCTCTGCAGCGTCAGGCTAGTCTGTCATTAACTGGTGCACTAAGCAAGAAGACTGTAGATGAGGTTTGGAGAGATATCCAACAAAACAAAGACAGTGAGGAGAAGAAGTCACGAGACAGACAGCCTACTTTAGGAGAGATGACATTGGAGGATTTCTTGGTCAAAGCAGGTATTGTTGCCGAAGCATCTTCTAATAAAAAGTATACTGGTACTATAGCTGGGATTGATTCAAGTGTAGCAGTACCACAGTTTCCTCCCCAAGGTCAGTGGATACAGTATGCACAACCACAATATCAGCATCCACAACAAAGTTTAATGGGGATTTATATGCCTAGCCAAGGTATAGCACAGCCATTACACATGGGGGCTGGTGCTTCATTGGATGTTCCATTTGCCGATAGTCAGGTGGCATTGTCTTCACCTCTAATGGGAACAGTGTCAGATACGCAGACACCTGGAAGAAAAAGGAGCACTCCAGAGGACATGATGGAGAAGACTGTTGAGAGGAGGCAGAAAAGGATGATAAAAAATCGAGAATCTGCTGCTCGTTCAAGAGCAAGGAAACAGGCATACACAAACGAATTGGAGCAAAAAGTATCACGTTTGGAAGAGGAAAATGAAAGGCTGAGGAAACGAAAGGAGCTAGAGAAGATGTTGCCATGTGCACCACCTCCTGAACCTAGATATCAACTTCGCCGAATAGCATCAGCTCCATTCTGA 882 0.4444 MYSLTLDEVQSQLGDLGKPLSSMNLDELLKNVWTVETSQSMVMDNEGTAQASQAALQRQASLSLTGALSKKTVDEVWRDIQQNKDSEEKKSRDRQPTLGEMTLEDFLVKAGIVAEASSNKKYTGTIAGIDSSVAVPQFPPQGQWIQYAQPQYQHPQQSLMGIYMPSQGIAQPLHMGAGASLDVPFADSQVALSSPLMGTVSDTQTPGRKRSTPEDMMEKTVERRQKRMIKNRESAARSRARKQAYTNELEQKVSRLEEENERLRKRKELEKMLPCAPPPEPRYQLRRIASAPF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi979g00001 293 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 292 IPR043452 GO:0003700|GO:0045893
Sebi979g00001 293 Pfam bZIP transcription factor 223 269 IPR004827 GO:0003700|GO:0006355
Sebi979g00001 293 SMART brlzneu 219 287 IPR004827 GO:0003700|GO:0006355
Sebi979g00001 293 Coils Coil 239 273 - -
Sebi979g00001 293 Gene3D - 221 274 - -
Sebi979g00001 293 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 221 266 IPR004827 GO:0003700|GO:0006355
Sebi979g00001 293 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 226 241 IPR004827 GO:0003700|GO:0006355
Sebi979g00001 293 SUPERFAMILY Leucine zipper domain 223 268 IPR046347 GO:0003700|GO:0006355
Sebi979g00001 293 CDD bZIP_plant_BZIP46 223 277 - -
Sebi979g00001 293 MobiDBLite consensus disorder prediction 197 293 - -
Sebi979g00001 293 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 221 273 - -
Sebi979g00001 293 MobiDBLite consensus disorder prediction 208 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi979g00001 Sebi-Chr979 4453 8275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi979g00001 1 293 bZIP Transcription Factor Family AT3G56850 56.187 4.07e-98 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi979g00001 bZIP_1 6.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi979g00001 K14432 - gmx:100101875 453.366