Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi976g00004 ATGACCATGATGGTGCATCATAATCATCACCACCGTTCATTCTCATCACCCTTTGATAATGATTCCTCTGCTGGTGATGCTGATGGTCCCACTACCTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGATGTTCCTGCTCTTGGTGCTGCCATTGATGGTGGCGGTGCTGCTTCTTCTGCTCTAATAAGACCTTTGCAGCCTTTTGACATTTCTTCTGCTTATACTCCTGCTACCACTACCTTCAAATCCCCAGCAGGTGGAATGGCGGCTTTGGGGTTTCCTTTCACAAGTGCACAATGGAATGAGCTTCAAAGACAAGCTATGATTTACAAGTACATGATGGCTTCTGTTCCTGTTCCTCCTGATCTTCTCATCCCAATTTCACTCACGCCTCCTACTTCTCGCTCTCCATTGGATGGTGGTTTCAATCTGAGGTTGTCAAGCAGCAACACTGATCCAGAGCCAGGTAGGTGCAGAAGAACAGATGGTAAAAAATGGAGATGTTCTAGAGATGTGGCCCCTAACCACAAGTATTGTGAGCGCCATATGCATAGAGGTCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTCACACCAACAACAGCCTCCAAATCAAAAGGGCTCGCCATGATTCCAATCCTTTTCCTTCACCTGATGTTTCAGCAGCTATTTCTAACCACACAACCACAAAAGATGGATCTTCATCCCATTTTCTTGCCTCTACTACAACTCATCCATACCTTGAATCTTCCCTTTCTCTTGATAACAATTTTGGTGTCAAAGCTGCAAATTTTGACTCCATGGCTTCTGTTTCTTCTAATAAAGAACGCAGGGGCTTGGAGTGGATGCTGAATGGGGATCCTATTTCCCTAGGTGCTTCTAACTCAGAATGGCAATCTCTTATGCATAACAAAGTTGCAATGACCAGTGAAGGTTCCTGTAATAACACTGAGACACAATATCTGAATTCATTTGCACTCTATAGTTCTGGACTGGATCAACAGGACAGGCGCCTTCCTCTGTTCCTAAATCCTCTTGTTCCCATGGAAAATCTCCAATCAGAGAAACCAAGGGGTTTCATTGATGCTTGGTCTAATGCAGAAACAGGTGAAGGCAATGCTAACACCAACAGCAAGAACTCTGCTGCATCAATTGGTAAATTATCCCTTTCTTCTCTTGATCTATCAATGGGGGGTAGTGGGGGTGGTGCTGTGCATGAAAACATGGGAACTATTGGAATGGGGTTGGGACTAATGGAGCCTGATGGAAACACACACAATGATACTAAAATCTCTCTCTCAAATTGGCTCAACCCACCAGCATCTTGGGTGGCTTCAACACCTGGGGGTCCTCTAGCTGAAGTTCTAAGGCCAAGCACAGTCACTGCCACCAGTGATGCAACCTCCAATCCATCCTCCCCAGTCATAACTCATGTTGATCCAAGTAGCCCTCTAGGAACAATGGTATCATCTCCATCTGGGGTTCTACAGAAAACACTTGCTACATTGTCTGATAGTAGTAGCAATAGCAGCCCAAGGATTGCATCATCAAGGGCCAATTCTGAGATTGCCTTGCTCAAGTTTCAATCAAATGTAAATTAA 1605 0.4461 MTMMVHHNHHHRSFSSPFDNDSSAGDADGPTTYMSFTNHINLVSDVPALGAAIDGGGAASSALIRPLQPFDISSAYTPATTTFKSPAGGMAALGFPFTSAQWNELQRQAMIYKYMMASVPVPPDLLIPISLTPPTSRSPLDGGFNLRLSSSNTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVHTNNSLQIKRARHDSNPFPSPDVSAAISNHTTTKDGSSSHFLASTTTHPYLESSLSLDNNFGVKAANFDSMASVSSNKERRGLEWMLNGDPISLGASNSEWQSLMHNKVAMTSEGSCNNTETQYLNSFALYSSGLDQQDRRLPLFLNPLVPMENLQSEKPRGFIDAWSNAETGEGNANTNSKNSAASIGKLSLSSLDLSMGGSGGGAVHENMGTIGMGLGLMEPDGNTHNDTKISLSNWLNPPASWVASTPGGPLAEVLRPSTVTATSDATSNPSSPVITHVDPSSPLGTMVSSPSGVLQKTLATLSDSSSNSSPRIASSRANSEIALLKFQSNVN 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi976g00004 534 ProSiteProfiles WRC domain profile. 154 198 IPR014977 -
Sebi976g00004 534 ProSiteProfiles QLQ domain profile. 96 131 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi976g00004 534 MobiDBLite consensus disorder prediction 1 23 - -
Sebi976g00004 534 Pfam WRC 155 197 IPR014977 -
Sebi976g00004 534 PANTHER GROWTH-REGULATING FACTOR 5 71 390 IPR031137 GO:0005634|GO:0006351|GO:0032502
Sebi976g00004 534 Pfam QLQ 96 129 IPR014978 GO:0005524|GO:0005634|GO:0006355
Sebi976g00004 534 SMART QLQ_2 95 131 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi976g00004 Sebi-Chr976 77325 79662 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi976g00004 88 500 GRF Transcription Factor Family AT4G37740 33.019 1.50e-39 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Sebi976g00004 WRC 5.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi976g00004 - - gmx:100803096 701.434