Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi974g00003 ATGGCAAGAGGGTATTGCCTATTACCTATTCCTGATACTCCAAAGACTAATGGTACTGAAATGCATCACATGGAAACAATAGTTGAACATAGCAACAACCATGAAGCATATCAGATAGTCAAGACTAGTGGTACCAATTTGTATAACATGGAGACAACAGTTGAACATAGCAACAACCATGAAGCATATCAGGTGGTTAAGACTAGTGGTACTGAATTGTATCACATGGAACATAACAACAACCATGAAGCATATCAGATAGATGAACAATTGAAAGATTATGTTTGTTCAGTGTGTGAGAACAGAAGACCAAAATTTGAATTGATGAAAGAGTTCACCTATGCAGAGCTGCATGAAGCCACAAATGGTTTTTCCCCAAAGAACTATTTGTCAGAAGGTGGATTTGGTTCTGTATACAAAGGGATGCTGAAAGGACTCAAGATTGCTGTTAAGCAACATAAGTGTGCAAGCCTCCAAGGAGAGAAGGAGTTCAAGTCTGAAGTTAATGCACTCAGCAAAGCATTACATGAGAATGTGGTCATGCTTTTAGGATCTTGTTCAGAGGGAAATAACAGACTTCTTGTATATGAATTTGTTTGTAATGGCTCACTTGACCAACATTTATCAGAATACTCTCGTAAACCTCTTACTTGGCCAGACAGGATCAAACTAGGAGATTTTGGTTTGGCTAGAACAGAACAAATGGACTCCATATACTCAACAGATGTTGTTGGAACTTTAGGGTATTTGGCACCAGAATATGCAGAATCTGAAAAATGTCTAAGCAGGGATCCTCAGAAGCGATTATCAATGGATACAGTGGTGAGTGCCTTAAGTCATATAGTAGAAGGCAGCACATGCAGTATTGTACTTAGACACTGTTCCCCAGCACGGTCAGATTCATCCTACGACATATCAGAATCTCTTGAATCAGATGTCTCTATGGAATTAGAAGGTGAAGATGGAAGCATGTATGTAGGATATACTCCAATTAATTTAAGACCCCCACCATCTCCTCCAATAGGAAGCACTTCATCATGTACATTTAGCATGTTCAAAGGGCTGAGTGAATCTCCTTCTGATGATTTAGCCAATAATGAGAAGAAGGGTGAAAGATCAAATAATCAAAGTGGGTGA 1137 0.3905 MARGYCLLPIPDTPKTNGTEMHHMETIVEHSNNHEAYQIVKTSGTNLYNMETTVEHSNNHEAYQVVKTSGTELYHMEHNNNHEAYQIDEQLKDYVCSVCENRRPKFELMKEFTYAELHEATNGFSPKNYLSEGGFGSVYKGMLKGLKIAVKQHKCASLQGEKEFKSEVNALSKALHENVVMLLGSCSEGNNRLLVYEFVCNGSLDQHLSEYSRKPLTWPDRIKLGDFGLARTEQMDSIYSTDVVGTLGYLAPEYAESEKCLSRDPQKRLSMDTVVSALSHIVEGSTCSIVLRHCSPARSDSSYDISESLESDVSMELEGEDGSMYVGYTPINLRPPPSPPIGSTSSCTFSMFKGLSESPSDDLANNEKKGERSNNQSG 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi974g00003 378 Gene3D Phosphorylase Kinase; domain 1 105 194 - -
Sebi974g00003 378 ProSiteProfiles Protein kinase domain profile. 124 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi974g00003 378 Gene3D Transferase(Phosphotransferase) domain 1 195 259 - -
Sebi974g00003 378 Pfam Protein tyrosine and serine/threonine kinase 128 221 IPR001245 GO:0004672|GO:0006468
Sebi974g00003 378 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 223 257 - -
Sebi974g00003 378 SUPERFAMILY Protein kinase-like (PK-like) 107 282 IPR011009 -
Sebi974g00003 378 MobiDBLite consensus disorder prediction 343 361 - -
Sebi974g00003 378 FunFam Proline-rich receptor-like protein kinase PERK8 86 198 - -
Sebi974g00003 378 MobiDBLite consensus disorder prediction 336 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi974g00003 Sebi-Chr974 93564 96110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi974g00003 112 263 Trihelix Transcription Factor Family AT4G32710 40.306 1.84e-33 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Sebi974g00003 PK_Tyr_Ser-Thr 4.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi974g00003 - - vum:124838318 324.324