Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi973g00009 ATGCCCGCAATAGGTCCTGATGGCAAGAAGAAAGAACCTGAGAGCAATGTGCTTTTGGCTACAATTGAAAATATGCAGTATGCTGTCACTGTAGATGTTCTTCACACGGTGTTTTATGCATTTGGCACTGTTCAGAAAATTGCTATATTTGAAAAGAATGGTCAAACTCAGGTTCTAATTCAATACCCTGATGTTACAACAGCAGTAACTGCCAAAGAAGCTTTGGAGGGACATTGCATATATGATGGTGGCTATTACCATATAATATCTAGACCCAACATACCAACTAAAAGAAGAAACACAACATCATCATCATCATTTATTCCACCACCAACAACAACAGAGACTGTGATGGTGAACTCAGTTGTTGACAATAATGCAAGAGAAACTGTGATGGTGAACTCAGTTGTTGACAATATTGCAAGAGAAACTGTGATGGTGAACTCAGTTGTTGACAATATTGCAAGAGAAACTGTGATAGTGAACTCAGTCGTGGACAATATTCCAAGGCATTGCAAGGGTAGGAGGAGTCGTGCTGCTAAGAAGACCACTACAACAGAACAAAAGAGGCAAAATAGTGAGGTTGGACAAACTTCAACCATTGAAATAGATCCACCTTTACATGAAGGCTCAGACCGTATGCACATCCAGGAAGACGAGCAAGTCTTCTATAAGCTTGATGATAGAAATGAGGGAATTGCAGCTGCAGTGGGACTGAGAGGAAGAATTACCAGAGGTGGAATTCTCTGCAGTTGTTGCCAAAAAGAAATGTCTGTGTGGTCATTTGAAAGACATGCAAACAGTGATCACAGAAAACCCTATGAACGTATTTACATCCTCCAAACACAAGAAAATCTCCAAGATTGCCTCATTGTTGTCTGGCATCATTCAACTGAAAGAGAACGCCGTGAAGAATTATGCTTTTCAACATTGCCCGTGAAGACCCTGTGGAATGTTGAAAAGCATAATTCTTCACGGGCAATGTTGAAAAGCAGAATTCTTCACGACGTTCTCTTTCAGTTGAATGAAGCCAGACAACAATGA 1044 0.4052 MPAIGPDGKKKEPESNVLLATIENMQYAVTVDVLHTVFYAFGTVQKIAIFEKNGQTQVLIQYPDVTTAVTAKEALEGHCIYDGGYYHIISRPNIPTKRRNTTSSSSFIPPPTTTETVMVNSVVDNNARETVMVNSVVDNIARETVMVNSVVDNIARETVIVNSVVDNIPRHCKGRRSRAAKKTTTTEQKRQNSEVGQTSTIEIDPPLHEGSDRMHIQEDEQVFYKLDDRNEGIAAAVGLRGRITRGGILCSCCQKEMSVWSFERHANSDHRKPYERIYILQTQENLQDCLIVVWHHSTERERREELCFSTLPVKTLWNVEKHNSSRAMLKSRILHDVLFQLNEARQQ 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi973g00009 347 PANTHER MATRIN 3/NUCLEAR PROTEIN 220-RELATED 12 84 - -
Sebi973g00009 347 MobiDBLite consensus disorder prediction 173 209 - -
Sebi973g00009 347 Pfam Tify domain binding domain 241 290 IPR032308 -
Sebi973g00009 347 Pfam RRM-like domain 15 84 IPR021790 -
Sebi973g00009 347 SUPERFAMILY RNA-binding domain, RBD 20 90 IPR035979 GO:0003676
Sebi973g00009 347 Gene3D - 14 114 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi973g00009 Sebi-Chr973 208549 211515 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi973g00009 212 294 PHD Transcription Factor Family AT4G14920 37.349 4.56e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi973g00009 K14948 - qsa:O6P43_004468 159.458