Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi970g00010 ATGGAAGAAGTATATGGTGCTAGTTTTGGCAATAAAATGACAAAGGCAAAGCCTTATTTGTTATCGGTGGGATTGCAATTTGGGTTCGCAGGAGCATACATATTCTCCATGGCCAGTCTCAATCATGGAATGAATCGTTTTGTGTTCATTGTTTATCGCAATGCCATTGCTGCATTAGCCCTCGCTCCTTTTGCATTCATTTTTGAAAGGAAAATTAGGCCAAAGATGACAATCACTGTCTTTATGCAGATAATGGCGCTCGCATTTTTGGAGCCAGTGATTGACCAAGGATTCACTTTCTTGGGAATGCAATATACCTCAGCATCATTTGCATCTGCTTTGATTAATGCTGTTCCCTCTGTCACCTTTGTGCTAGCCGTTATTCTCAGGTTAGAGCGTATAGATATGAAGAAGATTCGGAGCGTAGCGAAGGTGATGGGGACGTTGGTAACCTTTGGAGGCGCTTTGTTAATGACACTTTACAAAGGCCCTCAAATCCACCTTTTCTATTCTCCAAATACAACCCAGCAACATGGAACTCACTCCCCTCAGGCTCTCAAACACTGGCTATCTGGCACTCTCTTTCTACTCCTCGGTTGTGTCGCTTGGTCATCTTTCTTCATTTTACAGTCCATAACATTGAAAAGGTATCCGGCAGAAATGTCACTGTCCTCGTTGATATGCTTAGTGGGTGCTGTGCAAGCTTTCCTGGTGGCATTGGTGGCGGAGCATCACGCTGGGATTGCCGCATGGGCCATTGGTTGGGACTTTAGGCTCTATGGTCCTCTGTACACGGGAATAGTTACCTCAGGAATTACATATTATGCACAAGGGTTGGTATTGCAAAGCAGAGGCCCAGTATTCCTCACAGCTTTTAATCCCCTTTGCATGGTCATCACTTCTGCTTTAGGATCCTTCCTTTTCGGAGAGCAACTTCACTTGGGCAGTATCATTGGAGCCATCATTATCGCAATGGGTCTTTATTCTGTGGTGTGGGGTAAAGGCAAAGACCATTCAGACACTACGCCACCATCGCCTACAGCAAAGCAAACAGAGACACAACAGCAGCTGCCAATTACTTCATCTGAAATTGCCTAA 1098 0.449 MEEVYGASFGNKMTKAKPYLLSVGLQFGFAGAYIFSMASLNHGMNRFVFIVYRNAIAALALAPFAFIFERKIRPKMTITVFMQIMALAFLEPVIDQGFTFLGMQYTSASFASALINAVPSVTFVLAVILRLERIDMKKIRSVAKVMGTLVTFGGALLMTLYKGPQIHLFYSPNTTQQHGTHSPQALKHWLSGTLFLLLGCVAWSSFFILQSITLKRYPAEMSLSSLICLVGAVQAFLVALVAEHHAGIAAWAIGWDFRLYGPLYTGIVTSGITYYAQGLVLQSRGPVFLTAFNPLCMVITSALGSFLFGEQLHLGSIIGAIIIAMGLYSVVWGKGKDHSDTTPPSPTAKQTETQQQLPITSSEIA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi970g00010 365 MobiDBLite consensus disorder prediction 338 365 - -
Sebi970g00010 365 PANTHER WAT1-RELATED PROTEIN 17 344 IPR030184 GO:0016020|GO:0022857
Sebi970g00010 365 MobiDBLite consensus disorder prediction 340 365 - -
Sebi970g00010 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Sebi970g00010 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 336 - -
Sebi970g00010 365 Pfam EamA-like transporter family 21 159 IPR000620 GO:0016020
Sebi970g00010 365 Pfam EamA-like transporter family 191 331 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi970g00010 Sebi-Chr970 196489 200547 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi970g00010 10 363 Nodulin-like Gene Family AT4G08300 47.339 1.52e-122 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi970g00010 - - gmx:100812537 573.163