Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi970g00009 ATGGGTGCGTGGCTGAGAAATGCAAAGCCATATCTTCTATTGTTGGCCGTCCAATTTGGCTCTGCTGGCATGTTCATTTTCGCCATGGATGCTATCAAGAAAGGCATGAGCCATTACGTGTTCATCGTCTATCGTAATGCCATAGCCTCTATAACTCTCTCTCCCTTCGCATTTGTTCTAGAAAGGAAAGTTAGGCCCAAGATGACTGTCCGGGTATTTTCAGAGATTATGGCACTCGCTTTCTTCGAAATAATACTTGATCAATGTTTCGCCCTCTTGGGGATGAAATTAACGTCAGCGTCGTTTTTATCTGCTGTGATGAACTCCGCACCCTCCATTACTTTTGTGTTGGCAGTTATTCTAAAATTGGAGCACATGAAGATTAAGGAGGTGGCATGTCAAGCCAAAATGATTGGCACTGCAGTAACTTTCGGAGGAACCTTGCTAATGGCACTGTACAAAGGTCCAATTGTTAGTTTTGTGCGATCATCATCAAGTCACCATGCTGCACAGGCTGATCAGAATGTGACCGGCAACCACTGGGTCATAGGGACATGCTTCCTCCTCATTGGTTGTGCAGGATTTTCTATGTTTTACATATTGCAGGCCATAACATTGAGAAAGTACCCAGCAGAAATGTCCCTGGCTACATGGGTTTGCTTTATAGGTGCACTTCAAAGCTCTGTTGTAGCATTTTTTGCAGAGCGCCACCATCCTCATGCTTGGTCTCTCGGTTGGGATACAAGACTCTTTGCCCCTGCTTACGCGGGGATAGTTACTTCAGGGGTTCAGTATTACATACAAGGCATGGTCATAAAAACCATGGGTCCAGTTATTGTAACTGCTTTTAATCCCCTCCGTATGATCATAGTCACTGCCATGGCTTGCATTATTCTCTCTGAGCAACTCTACCTTGGAAGTATTGTTGGAGCAATAGTGGTGGTTGTTGGGCTTTATGCTGTTGTATGGGGAAAATCTAAAGAAAACAAAGCTCGGATGCCTGCAACAGAGAACTCATTGCAAAACCAACAGCAGCTACCGGTCACAGCTCCCAGAAAAGATAATAACTGTAACAAAATTGTTCATGGTGATGAAACTGGCGATGAGGAGGCCACGGTATCAGAAACAACAAGTCAAGGAAAATAG 1146 0.4442 MGAWLRNAKPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIASITLSPFAFVLERKVRPKMTVRVFSEIMALAFFEIILDQCFALLGMKLTSASFLSAVMNSAPSITFVLAVILKLEHMKIKEVACQAKMIGTAVTFGGTLLMALYKGPIVSFVRSSSSHHAAQADQNVTGNHWVIGTCFLLIGCAGFSMFYILQAITLRKYPAEMSLATWVCFIGALQSSVVAFFAERHHPHAWSLGWDTRLFAPAYAGIVTSGVQYYIQGMVIKTMGPVIVTAFNPLRMIIVTAMACIILSEQLYLGSIVGAIVVVVGLYAVVWGKSKENKARMPATENSLQNQQQLPVTAPRKDNNCNKIVHGDETGDEEATVSETTSQGK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi970g00009 381 MobiDBLite consensus disorder prediction 333 352 - -
Sebi970g00009 381 Pfam EamA-like transporter family 183 322 IPR000620 GO:0016020
Sebi970g00009 381 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020
Sebi970g00009 381 PANTHER WAT1-RELATED PROTEIN 10 336 IPR030184 GO:0016020|GO:0022857
Sebi970g00009 381 MobiDBLite consensus disorder prediction 332 381 - -
Sebi970g00009 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 218 327 - -
Sebi970g00009 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi970g00009 Sebi-Chr970 166943 168904 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi970g00009 5 376 Nodulin-like Gene Family AT2G37460 42.246 3.30e-111 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi970g00009 - - gmx:100820569 580.482