Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi970g00005 ATGGAGGACCAAAATGGTAGTGGTAAGTTGAGCAAGGGACTCCGCAAGGTGAAGCCTTACCTTGCTATATTGTCCCTTCAGTTTGGTTACTCTGGCATGTATATTATCACTATGGTTTCTTTCAAACATGGCATGAGCCATTGGATACTCTCAGTGTACCGTCATGTAGTTGCGGCCATTATTATAACACCTTTCGCCCTTGTCCTTGAAAGAAAAATAAGGTCAAAGATGACTCTCCCTATATTCCTGAGGATAGTGGCACTTGGTTTCCTTGAGCCAGTGCTAGATCAAAATTTGTACAACATGGGGATGAAGATGACCTCAACAACGTTTGCATCTGCAACCGTTAATGTCCTTCCAGCCATTACTTTTATAATGGCACTCATTTTCAGGTTAGAGAGCATCAATTGGAGAAAATTTCACAGCGTGGCGAAGGTGATTGGAACCGTTATAACAGTTTCAGGGGCTATGGTTATGACTTTGTACAAAGGCCCTGCTTTTCAGATCATAAAGGGAGGAGGAGCAATTAACCACCATGGCAGCTCCAACACTGATGAACCCTCTGATCAGAACTGGATTCTTGGCACAATCATGCTCATTTCAAGTTGTGCTAGTTGGGCTGGCTTCTTCATTTTGCAATCATTCACTTTGAAGAAGTACCCAGCAGAGCTGTCACTCACAGCTTGGATTTGCTTGTTGGGAATTATTGAGGGTTCAATCGCATCTTTCATATTTGAACGGGACATGAGTGTGTGGGTCATAGGCTGGGACTCAAGGCTTCTTGCTTGTGTTTATTCTGGGGTGATATGCTCTGGAATGGCATACTATGTACAAGGGGTTGTGACCAGGGAACGTGGACCAGTGTTTCTAACATCTTTCAGTCCAATGTGTATGATTATCACTGCTGCATTGGGTTCACTTGTCCTAGCTGAGCAAGTTCATCTGGGAAGTATATTTGGAGCTATTCTGATTGTGTCGGGGCTTTACACTGTGGTATGGGGCAAAAGCAAAGACAGACAGAACACAGATACAGGGAAAGGGGAAGTGGAAGGATTGCCAATTAAGGATGGTACAAGAACAGATCAATCAGACAATTTTGATGGAATTGAGATCAATGTTCCTGCCAAGAAAGGGGCAGGGAAAATTGCTCCACCACAAGCATGA 1164 0.4381 MEDQNGSGKLSKGLRKVKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAIIITPFALVLERKIRSKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLPAITFIMALIFRLESINWRKFHSVAKVIGTVITVSGAMVMTLYKGPAFQIIKGGGAINHHGSSNTDEPSDQNWILGTIMLISSCASWAGFFILQSFTLKKYPAELSLTAWICLLGIIEGSIASFIFERDMSVWVIGWDSRLLACVYSGVICSGMAYYVQGVVTRERGPVFLTSFSPMCMIITAALGSLVLAEQVHLGSIFGAILIVSGLYTVVWGKSKDRQNTDTGKGEVEGLPIKDGTRTDQSDNFDGIEINVPAKKGAGKIAPPQA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi970g00005 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 337 - -
Sebi970g00005 387 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020
Sebi970g00005 387 Pfam EamA-like transporter family 29 152 IPR000620 GO:0016020
Sebi970g00005 387 MobiDBLite consensus disorder prediction 338 387 - -
Sebi970g00005 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 153 - -
Sebi970g00005 387 MobiDBLite consensus disorder prediction 339 363 - -
Sebi970g00005 387 PANTHER WAT1-RELATED PROTEIN 19 339 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi970g00005 Sebi-Chr970 97372 102431 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi970g00005 14 378 Nodulin-like Gene Family AT4G08300 64.481 4.99e-169 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi970g00005 - - gmx:100811114 667.151