Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi96g00106 ATGGAGAGAGTGAATTCATTAGGGCTACTAAGAACGAAATCGGATCAGCTGGTGGAGTCTATGGTGGCGGCGCTGAAGTCGCCGCCGTCAAGTGATCACTCAACAAATGGGCCAGCGGAAGGCAGCGCAACGCTGTCGAGGAAGTCGAGCCGGCGGTTGACGGCGGCGGCGTCACCAGGGCGTGGTGGTGGAAAGAACACACACATAAGGAAGTCAAGGAGTGCTCAAATGAAGTTTGATGTTGATGAGTTGAGTAGTGGTGCTGCTCTTAGTAGAGCTTCAAGTGCTAGCTTGGGTCTCTCATTCTCTTTCACTGGCTTCACTATGCCTCCTGATCAAATTGCTGATTCCAAACCCTTCAGTGATGATGATATGATCCCGGAGGATATTGAAGCTGGTGGAACTAAGACAAAGTTTCAAACAGAACCTACTCTGCCCATATATCTAAAGTTCACGGATGTGACCTACAAGATAGTGCTCAAAGGCATGACAACAACTGAGGAGAAGGATATCCTGAATGGGATCACTGGTTCTGTAAATCCAGGTGAAGTTTTGGCATTGATGGGTCCCTCTGGAAGTGGAAAGACAACTCTTTTGAATCTTCTTGGAGGAAGGATAAGTCAGCCAACAATTGGTGGTTCTATCACTTACAATGACCAATCATATTCCAAGTTCCTCAAGAGCAGGATAGGATTTGTGACACAAGATGATGTTCTCTTTCCTCACCTAACTGTTAAAGAGACATTGACGTATGCAGCCAGGCTAAGACTTCCAAAGACATTCACAAAAGAGCAAAAGGAAAAGAGAGCTTTAGATGTCATCTATGAGCTTGGCTTGGAGAGGTGCCAAGACACTATGATTGGTGGTTCCTTTGTTCGTGGAGTATCTGGTGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTGTTTCTTGATGAACCAACATCTGGTTTGGATTCTACAACAGCCTTGAGGATTGTTCAGATGCTGCAAGACATAGCAGAGGCTGGTAAAACTGTGGTGACAACAATCCACCAACCATCAAGCAGACTCTTTCACAAATTTGACAAGTTGATCCTTCTTGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCAGAAGCTATGAATTATTTCCAATCTATAGGATGTACACCTCTTATTTCCATGAACCCTGCAGAGTTTTTGCTAGACCTTGCTAATGGAAACATAAATGATGTTTCCGTGCCTTCAGAATTGGAGGATAAAGTGCAAATGGGAAATGCAGTAGCTGAAACACATAATGGGAAACCATCACCAGCAGTTGTACATGAGATCGAGTTGCAGAAAACAGAAAAGAAGAAAATAATGGTTTCCATCCCCCTTGATGAATCACTGAAGTCTAAAGTAAGTTCTAAAAGACAATGGGGAGCAAGTTGGAATGAGCAATTTTCCATATTATTTTGGAGAGGAATCAAAGAAAGGAGGCATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTTTATCCACTGCAATCATCTTAGGATTACTCTGGTGGCAATCAGATACTAAGACCCCAAAAGATCTACAAGATCAGGCAGGATTGCTTTTCTTCATTGCTGTCTTCTGGGGATTCTTTCCTGTTTTCACTGCAATATTCACATTTCCTCAAGAGAGAGCCATGCTGAACAAAGAAAGGGCAGCAGATATGTACAGATTAAGTGCATACTTCCTTGCTAGAACTACAAGTGACCTTCCACTAGACTTGATACTACCAGTACTTTTTCTCATTGTGGTTTATTTCATGGCTGGTCTGAGACTGAGTGCAGCTCCTTTTTTCCTCACCATTCTTACTGTTTTCCTCTGCATTGTGGCAGCTCAGGGACTTGGACTTGCTATTGGGGCTACACTCATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTAACTGTGATGACCTTCATGCTGGCTGGAGGATTTTTTGTGCAGAGAGTGCCCATATTCATTTCTTGGATCCGCTACATGTCATTCAACTACCACACCTACAAACTTTTGCTCAAGGTGCAATATGAACACACTACGGCTAGCCATAGCTTAATTGGGGTCAAAATTGATGGTGGTTTAACAGAGGTGGCTGCTCTGATTGTCATGGTTTTTGGTTACCGCTTCTTGGCATATCTTTCTTTGCGGCGGATGAAACTTCAATCTTGA 2214 0.4336 MERVNSLGLLRTKSDQLVESMVAALKSPPSSDHSTNGPAEGSATLSRKSSRRLTAAASPGRGGGKNTHIRKSRSAQMKFDVDELSSGAALSRASSASLGLSFSFTGFTMPPDQIADSKPFSDDDMIPEDIEAGGTKTKFQTEPTLPIYLKFTDVTYKIVLKGMTTTEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRISQPTIGGSITYNDQSYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTFTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMNYFQSIGCTPLISMNPAEFLLDLANGNINDVSVPSELEDKVQMGNAVAETHNGKPSPAVVHEIELQKTEKKKIMVSIPLDESLKSKVSSKRQWGASWNEQFSILFWRGIKERRHDYFSWLRITQVLSTAIILGLLWWQSDTKTPKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDLPLDLILPVLFLIVVYFMAGLRLSAAPFFLTILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQRVPIFISWIRYMSFNYHTYKLLLKVQYEHTTASHSLIGVKIDGGLTEVAALIVMVFGYRFLAYLSLRRMKLQS 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi96g00106 737 FunFam ABC transporter G family member 22 159 389 - -
Sebi96g00106 737 Pfam ABC-2 type transporter 352 413 IPR043926 GO:0140359
Sebi96g00106 737 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 149 395 IPR003439 GO:0005524
Sebi96g00106 737 CDD ABCG_EPDR 146 377 - -
Sebi96g00106 737 Pfam ABC transporter 172 323 IPR003439 GO:0005524
Sebi96g00106 737 ProSitePatterns ABC transporters family signature. 295 309 IPR017871 GO:0005524|GO:0016887
Sebi96g00106 737 SMART AAA_5 181 372 IPR003593 GO:0016887
Sebi96g00106 737 Gene3D - 148 390 IPR027417 -
Sebi96g00106 737 Pfam ABC-2 type transporter 482 691 IPR013525 GO:0016020|GO:0140359
Sebi96g00106 737 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 388 IPR027417 -
Sebi96g00106 737 MobiDBLite consensus disorder prediction 27 53 - -
Sebi96g00106 737 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 113 727 - -
Sebi96g00106 737 MobiDBLite consensus disorder prediction 24 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi96g00106 Sebi-Chr96 2037295 2044066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi96g00106 171 409 Calmodulin-binding Proteins AT2G36910 29.388 8.85e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi96g00106 K05681 - gmx:100798801 1238.79