Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi96g00081 ATGGATCCTTTTGATGATATTTTACCTGGGGCTCCTGCTGCACGTGCTCGGCCAGGTGGCAAGTTCATGCCAAAGGCCAAATCGAAACAGCTGCCCCGAAAGGAAATATCAGAACACGCAACCTCATCGAGAGATGGAAAGAACACACATGTTGCTTCATCATCCACTGGGACAGACTCCAAAGGAATTTCTCAGAATGAATGTAATGCAGTTACTTCAACGTTAAGTACATCAACAGAAGAATCGATGAGGTCCCATCATCGTCCAGAGGTACTTCCAAATTTGGAGGATGTCACAAATTCTGAAATAGGAAATCCTCAACAAGTTAGTGTAAACAGAGATACTGCAGCCCTAGTGGATTATCTGCCTTCCATGACTGGAGTATCTGAAGTTGATTCTAATCAGAATTTTACAAACTTTACTGAATCAGCTTCTGAGGCAGATCCTGTAGGTTTTGAGGTGGGATCAGTCACTAACTTCATTCGTGAGACCGATCTTAACAGTGGTACAAGACAACCAGTTCACTCTGCCAAAGCTGTAGAAAATGTATTGAATAATATGACTGCTCTGTCTACAACATGCTCAACCATAGGTAGGATGGAAGAGCCACCTAACAGTGGGGAAGGTTCAGTTCTTGATAGCAACAGGAGCTTGGAACTTATTGATAATTCAGTGCAAGCTAACCCAGATAAGGTTGCAATATTTGAGAGCAATGTTCATTCAGATTTTAACTTTAGAAGAGAACAAGAGGTAGTGTCTGCAAAATTTGAATTGGATCCTTTCAGCAATGTCCTCCCTGATCCTGGCACTAGGAATGCTCATAAGTTTCAACCCAAGATTAAGCCCCGACCAAGAGTAGGCAATGCACCAGCTATTGCTTCTGCTTCAACTAGTGTTATGGAAAAATCTATTGGGTTGCCTACTACTTGCACAAATGAGGTTCAATCTTTTCAGTCTAGTGGTGATGGTAGTGGCGGACTAAACCAACCAACCAGTTTACCTTTAACCACATCAGAGATTGTTAAGACAACTGATTTATCCAATAAGTTTGATTATATGAGCTCAAGTACTCCATTCTCTGAAGACAACAGAAGCTTGGCAGCAGTAATTCCTTCCCAATCAGATTCCCTGAATGCTATGCTTTCAGAAGTTGTAGTTCATAATGGAACTAGAGATTGGCCCTCTAGCTTTGGTAAATCAGCTGGAGAGACTGCAGACATTTTCTCAGGGCTGGAATCCCTTGATGACTTCCTCACCCAAGCTGCCCCGGATACAGGAAAACCATCTCTTCATTCTTTCAATGAGAAGGGTACGGAGGAAAATTTTGTCATTCCAGCTTGTACTTCTATTAACTCTTTTGGGATACGTGATACTGCCCAAGTTCAAAGGTGTCCTGGACCCGAGTATCATACCACCCCAGATTCGTTACCCTTCAATGAAGCTGCAGTCCTCAATAAGGATGATACTCACACAAACAATAGAAGGTCGGAAACAGAGGATGTTGTGGACTTGAATCCTGTCTGCCCAGTTGACGATGTATTTGATTATCAATCCATGAAATCTGGCACAGATCCAACTTCTGAAATTCCAGTGCATGAAGAATTGACAAAGTCTGCAGATAGTCCCACTTTGGCTGATCTTTTGCATCAGCATGTTACTGAAGAAAAAGAAGATGCTAACAGGAGAAAAAAGAATGGCACAATGTCAAGTTCTCTAAGGAAGCACGGGGGATCTTCAATAACTGGCGAGGAGGGTAAAGGTGATGAACTTCAAGAAAATGGTGATGACTATGAAGTGGATTATTCATCCAAGAAGAAAAGAGCGTCAACAAGTTCAAAGAAGAAGTCTGCAGCTAAAAATGGAAAGACATCTCAAAAGCGTAAGAAGGCTGATGATGATTTAGAAAAAACTACTAAAGAACCTCCCAAAAAGTTCTCTCATTCAACCCGACGAAAAAAAAGATGTGTTGACAAGGCTCTGCTGGAAATTCCTGAGGATGAACTTGATCCTCGAACCTTGCCCATTAAGGATATCATTTTACTTGCAGAATATAGAGAGCGGCTGGCGAAAAAGGAGGCAACAACTTCAAAAACATCTTCCACCAATCAAAGTGGTGGAGGTTTTCTACATGAGGCTGATGCTAATGATGAAGAGGAGATATTTGGATCAGAAGATGGTAGAGACCCAGGTGATGGTGAAGCCAGTGAAGAGATTCCATTAGCTCCCTCTTTATTTAATTACCAGTCTTTCATGGACAAGGCACCTAGGGGGAAATGGTCAAAACAAGATACTGAACTGTTTTATGAGGCTGTTAGAGAGTTTGGAACAGATTTTTCTATGATACAACAACTTTTTCCTGGTCGAACACGTCATCAAATTAAGTTGAAGTACAAGAAGGAAGAGCGGCAGCATCCTTTACAGTTATCTGACGCTCTAAATAATCGTCCAAAAGATCACCCGCATTTTAAATTGGTGATTGAGCAACTACAACAAGCTTCTACCAAGGCAGAACAAGACCCTGGCAAAGATGCCTCGGATTTCATGACCGGGGAGGAGGTTGAGGAACCGATACCTGAAACTAATGAGGAGGTTGCACCAACTAAGCAGGACACCGATGTTAAAGATCAGGAAGGTCCTGTGGAATTACATAGTCCAGAGCAATCTGAAGATAGTGATGATGACTTTCAAAGATGGTCTCAATATAAAAGTGATTATTAG 2718 0.4187 MDPFDDILPGAPAARARPGGKFMPKAKSKQLPRKEISEHATSSRDGKNTHVASSSTGTDSKGISQNECNAVTSTLSTSTEESMRSHHRPEVLPNLEDVTNSEIGNPQQVSVNRDTAALVDYLPSMTGVSEVDSNQNFTNFTESASEADPVGFEVGSVTNFIRETDLNSGTRQPVHSAKAVENVLNNMTALSTTCSTIGRMEEPPNSGEGSVLDSNRSLELIDNSVQANPDKVAIFESNVHSDFNFRREQEVVSAKFELDPFSNVLPDPGTRNAHKFQPKIKPRPRVGNAPAIASASTSVMEKSIGLPTTCTNEVQSFQSSGDGSGGLNQPTSLPLTTSEIVKTTDLSNKFDYMSSSTPFSEDNRSLAAVIPSQSDSLNAMLSEVVVHNGTRDWPSSFGKSAGETADIFSGLESLDDFLTQAAPDTGKPSLHSFNEKGTEENFVIPACTSINSFGIRDTAQVQRCPGPEYHTTPDSLPFNEAAVLNKDDTHTNNRRSETEDVVDLNPVCPVDDVFDYQSMKSGTDPTSEIPVHEELTKSADSPTLADLLHQHVTEEKEDANRRKKNGTMSSSLRKHGGSSITGEEGKGDELQENGDDYEVDYSSKKKRASTSSKKKSAAKNGKTSQKRKKADDDLEKTTKEPPKKFSHSTRRKKRCVDKALLEIPEDELDPRTLPIKDIILLAEYRERLAKKEATTSKTSSTNQSGGGFLHEADANDEEEIFGSEDGRDPGDGEASEEIPLAPSLFNYQSFMDKAPRGKWSKQDTELFYEAVREFGTDFSMIQQLFPGRTRHQIKLKYKKEERQHPLQLSDALNNRPKDHPHFKLVIEQLQQASTKAEQDPGKDASDFMTGEEVEEPIPETNEEVAPTKQDTDVKDQEGPVELHSPEQSEDSDDDFQRWSQYKSDY 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi96g00081 905 Gene3D - 759 821 - -
Sebi96g00081 905 SUPERFAMILY Homeodomain-like 757 805 IPR009057 -
Sebi96g00081 905 CDD SANT 758 799 IPR001005 -
Sebi96g00081 905 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 751 807 IPR017930 -
Sebi96g00081 905 MobiDBLite consensus disorder prediction 865 905 - -
Sebi96g00081 905 SMART sant 755 803 IPR001005 -
Sebi96g00081 905 MobiDBLite consensus disorder prediction 694 708 - -
Sebi96g00081 905 MobiDBLite consensus disorder prediction 554 656 - -
Sebi96g00081 905 MobiDBLite consensus disorder prediction 517 542 - -
Sebi96g00081 905 MobiDBLite consensus disorder prediction 46 67 - -
Sebi96g00081 905 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 17 905 - -
Sebi96g00081 905 MobiDBLite consensus disorder prediction 608 623 - -
Sebi96g00081 905 FunFam Predicted protein 759 838 - -
Sebi96g00081 905 ProSiteProfiles Myb-like domain profile. 751 801 IPR001005 -
Sebi96g00081 905 MobiDBLite consensus disorder prediction 798 905 - -
Sebi96g00081 905 MobiDBLite consensus disorder prediction 624 644 - -
Sebi96g00081 905 MobiDBLite consensus disorder prediction 28 45 - -
Sebi96g00081 905 MobiDBLite consensus disorder prediction 268 287 - -
Sebi96g00081 905 Pfam Myb DNA-binding like 749 832 IPR039467 -
Sebi96g00081 905 MobiDBLite consensus disorder prediction 316 336 - -
Sebi96g00081 905 MobiDBLite consensus disorder prediction 690 737 - -
Sebi96g00081 905 MobiDBLite consensus disorder prediction 1 67 - -
Sebi96g00081 905 ProSiteProfiles SANT domain profile. 758 802 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi96g00081 Sebi-Chr96 1604169 1610413 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi96g00081 Myb_DNA-bind_7 2.8e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi96g00081 K15198 - gmx:100792788 1017.68