Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi96g00074 ATGGGCGTCAATTCCTTGCCATCGGAGCAATCTACCTTTGATCTCGACGAGCAGATCTCACAGCTCGTGCAATGCAAGCCACTTTCCGAGCAACAGGTTAGAGTTTTATGCGAGAAGGCTAAGGAGATTTTTATGAGTGAAAGTAATGTCCAGTGCCCAGATACTAATTACTTGTTCATGGGTGATTATGTGGACCGGGGTTATTATTCAGTTGAAACTGTAACGCTCCTTGTGGCACTGAAAGTGCGGTATCCTCAGCGAATTACAGTTCTTAGAGGAAACCATGAAAGCCAACAGATCACTCAAGTATATGGATTTTACGATGAATGCCTAAGAAAGTATGGTAATGCTAATGTTTGGAAGATCTTTACAGACCTTTTTGATTTCTTTCCATTGACTGCATTGGTTGAATCAGAAATCTTTTGCTTACATGGTGGACTTTCACCTTCAATTGAGACCCTTGATAACATAAGGAGCTTTGATCGTGTTCAAGAGGTTCCTCATGAAGGGCCCATGTGTGATCTGTTGTGGTCTGACCCAGATGATAGATGTGGCTGGGGAATTTCTCCTCGTGGTGCTGGGTATACTTTTGGCCAGGATATATCTGAACAATTTAATCACACAAACAGTCTTAAGTTGATCGCTAGAGCTCATCAGCTAGTTATGGATGGATTCAACTGGGCTCATGAACAAAAGGTGGTTACCATTTTTAGTGCACCTAACTACTGCTATCGATGTGGGAACATGGCTTCCATTTTGGAGGTTGATGATTCCAAAGGCCACACATTTATCCAGGCAGGTAACATTCCACTTATTTGTGACGCACAAGAACTTGCTGGACACCCTGCTGGAGAAGTCGCCTAG 864 0.4317 MGVNSLPSEQSTFDLDEQISQLVQCKPLSEQQVRVLCEKAKEIFMSESNVQCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITVLRGNHESQQITQVYGFYDECLRKYGNANVWKIFTDLFDFFPLTALVESEIFCLHGGLSPSIETLDNIRSFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNSLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDSKGHTFIQAGNIPLICDAQELAGHPAGEVA 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi96g00074 287 CDD MPP_PP2A_PP4_PP6 14 265 - -
Sebi96g00074 287 SUPERFAMILY Metallo-dependent phosphatases 9 270 IPR029052 -
Sebi96g00074 287 Pfam Calcineurin-like phosphoesterase 50 219 IPR004843 GO:0016787
Sebi96g00074 287 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 51 268 IPR047129 GO:0004722
Sebi96g00074 287 SMART pp2a_7 28 270 IPR006186 GO:0016787
Sebi96g00074 287 Gene3D - 7 271 IPR029052 -
Sebi96g00074 287 ProSitePatterns Serine/threonine specific protein phosphatases signature. 91 96 IPR006186 GO:0016787
Sebi96g00074 287 PRINTS Serine/threonine phosphatase family signature 210 230 IPR006186 GO:0016787
Sebi96g00074 287 PRINTS Serine/threonine phosphatase family signature 154 181 IPR006186 GO:0016787
Sebi96g00074 287 PRINTS Serine/threonine phosphatase family signature 57 84 IPR006186 GO:0016787
Sebi96g00074 287 PRINTS Serine/threonine phosphatase family signature 125 151 IPR006186 GO:0016787
Sebi96g00074 287 PRINTS Serine/threonine phosphatase family signature 90 114 IPR006186 GO:0016787
Sebi96g00074 287 PRINTS Serine/threonine phosphatase family signature 232 248 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi96g00074 Sebi-Chr96 1441595 1448385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi96g00074 44 216 Calmodulin-binding Proteins AT5G63870 32.536 1.39e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi96g00074 K04382 - gmx:100817449 515.768