Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi96g00051 ATGGAGCTGGCTTTGAGCTTAGGAGACACACCAAAGCCCTTCTCTTTCCTCGACAAGCCCACAAAAGACCCACCCGGTTTCTGCATAGCACGAGGAGGTACTACTTTCACCGCAGAGGAAAAAACTGGCCACGAGGAAACAAGAGGTTCCTCAGATCCACCCGTTCAGCTAAACCTTCTTCCTTTCACTCCGGTTCTCAGATCCAACCCTTCTTCTCACCTTAAAATCCCTTGGCTCACCGATCCGTTGTTAGTTGCACGCGATGAACGAATGAGGCTGGACGTGAACCGTTTCCCGGTGGCGGTTGAAGACGGCGACGACGGTACCTCACTGTCGTCATCCCCTAACAGTGCGGTGTCACCGTTTCAAATGGATTTCGGTTTGAGGAATAGCAATGCAGAGTATGGTGCGAGAAACAAGAGAGAACATGAGAGTGAGGCAGAGAGAGCGAGTTCAAGAGCGAGTGATGACGAGGAAAATGGATCAACTCGGAAGAAACTCAGACTCTCTAAGGAACAATCAGCTTTTCTAGAAGAAAGCTTCAAAGAACACTCCACTCTCAATCCTAAGCAGAAACTTGCACTTGCAAAACAGTTGAATCTTCGTCCTCGTCAAGTGGAAGTTTGGTTTCAGAATAGAAGGGCAAGGACAAAGTTGAAGCAGACGGAAGTGGATTGTGAGTATTTGAAGAGATTGTGTGACGCGCTAACAGATGAGAATAGGAAGTTACAGAAGGAACTGCAAGAACTAAGAGCCTTGAAAACTTCTCAACCGTTTTACATGCAGCTTCCAGCTACCACTCTCACCATGTGTCCCTCTTGTGAACGGGTAGCTACCAATTCCTGCACTGCCCCTACCACCAACCAAACTACAAACAACACCACTTATCCAATCCCAGTGCCAGTGGAGTTGTCGCTTAGCAAGCCCAGAATATTGCCCTTCTCTAATACTCAGGCCCAACAACAACAGGCCCAAACCCCCCAGATGGCTTCATGA 996 0.4839 MELALSLGDTPKPFSFLDKPTKDPPGFCIARGGTTFTAEEKTGHEETRGSSDPPVQLNLLPFTPVLRSNPSSHLKIPWLTDPLLVARDERMRLDVNRFPVAVEDGDDGTSLSSSPNSAVSPFQMDFGLRNSNAEYGARNKREHESEAERASSRASDDEENGSTRKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRLCDALTDENRKLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATNSCTAPTTNQTTNNTTYPIPVPVELSLSKPRILPFSNTQAQQQQAQTPQMAS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi96g00051 331 FunFam Homeobox-leucine zipper protein 18 148 225 - -
Sebi96g00051 331 Coils Coil 226 256 - -
Sebi96g00051 331 SUPERFAMILY Homeodomain-like 156 221 IPR009057 -
Sebi96g00051 331 MobiDBLite consensus disorder prediction 1 20 - -
Sebi96g00051 331 MobiDBLite consensus disorder prediction 101 169 - -
Sebi96g00051 331 MobiDBLite consensus disorder prediction 107 127 - -
Sebi96g00051 331 MobiDBLite consensus disorder prediction 135 169 - -
Sebi96g00051 331 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 45 293 - -
Sebi96g00051 331 Gene3D - 168 218 - -
Sebi96g00051 331 ProSitePatterns 'Homeobox' domain signature. 195 218 IPR017970 GO:0000981|GO:0006355
Sebi96g00051 331 SMART HOX_1 162 224 IPR001356 GO:0003677
Sebi96g00051 331 Coils Coil 140 160 - -
Sebi96g00051 331 Pfam Homeodomain 164 218 IPR001356 GO:0003677
Sebi96g00051 331 CDD homeodomain 164 221 IPR001356 GO:0003677
Sebi96g00051 331 ProSiteProfiles 'Homeobox' domain profile. 160 220 IPR001356 GO:0003677
Sebi96g00051 331 Pfam Homeobox associated leucine zipper 220 254 IPR003106 GO:0006355|GO:0043565
Sebi96g00051 331 SMART halz 220 263 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi96g00051 Sebi-Chr96 921141 922429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi96g00051 156 319 Homeobox Transcription Factor Family AT4G37790 65.269 3.27e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sebi96g00051 Homeodomain 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi96g00051 K09338 - gmx:100776113 400.979