Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi96g00047 ATGAAGAATATCACGAGAGGCTCCACGAAGGCGGTTATTTCCATGTCGCCACCTTTATCACCGTCGAGCCAGGCGAGGACGAAGGAAATGATGGCGGCGCTGAGGAGGATCCGAACCAAAATATATGGCGTCGATTCTCCACTTCGTCAGAACTCAGCCCCCGTCTTCAGACTCACCTTGAAATGCTCCTCGCATTCGCTCACATTCCTAGACCACACCTTGAAGATTTCTCGCTCTGAATGTAAATTTTTGGGTGGATTGTGTTCTGATTTGCAGCCTCTCAAACTCAAAATCACGATACTATTATTTAGTGTTTTGTGTTCTAATTCAATGCTTATTTGCATTGGTAGACTAGGTTGTCATGCTGGTGGATGGAAGGGAATTAGACGAAGTGTACTCAATAGGCTCCGTTTGTTGCAGGTACTTAGTACTCTGGTTCTGGTTGTTTCCTGTATAGAGATTTTCTTGTATAGGAGATGTAGAAATATAACCTGCATGAATTTGCTTCCTGTTGATGACTGTGACTGCAAGATTTGCTCAGGAAACAAAGGGTTTTGCAGCAATTGCATGTATCTTGTATGTTTGAGCTTTGATTGTGCAAGTAACACTTGTAGTTGGATTGGATGTGATGTTTGTTCCCACTGGTGCCATGCTGCCTGTGGCATCCAGAGGAATCTCATCAAACCTGGGCCTAACTTGAAGGGGCCTTCAGGGACCTCAGAGATGCAGTTTCATTGTATTGGCTGTGGACATGCCTCAGAAATGTTTGGTTTTGTTAAACATGTGTTCATGTGTTGTGCAAAGGATTGGGGACTTGAAACCTTGATCAAAGAGCTTGACTGTGTAAGGAGGATTTTCAGGGGAAATGAAGATCGCAAAGGGAAGGAATTGCAATTTAAAACCGATGACATGTTATTAAAGCTTCAAACTAAAATGGTATCTCCTTCAGATGCCTGCAATTACATCATACAATTTTTCAGCTGTAAGTGTCTGGACTCTGCTCTTTCCTTCTAA 1014 0.43 MKNITRGSTKAVISMSPPLSPSSQARTKEMMAALRRIRTKIYGVDSPLRQNSAPVFRLTLKCSSHSLTFLDHTLKISRSECKFLGGLCSDLQPLKLKITILLFSVLCSNSMLICIGRLGCHAGGWKGIRRSVLNRLRLLQVLSTLVLVVSCIEIFLYRRCRNITCMNLLPVDDCDCKICSGNKGFCSNCMYLVCLSFDCASNTCSWIGCDVCSHWCHAACGIQRNLIKPGPNLKGPSGTSEMQFHCIGCGHASEMFGFVKHVFMCCAKDWGLETLIKELDCVRRIFRGNEDRKGKELQFKTDDMLLKLQTKMVSPSDACNYIIQFFSCKCLDSALSF 337
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi96g00047 337 CDD PHD_OBE1_like 190 249 IPR047578 -
Sebi96g00047 337 MobiDBLite consensus disorder prediction 1 25 - -
Sebi96g00047 337 Pfam PHD - plant homeodomain finger protein 160 284 IPR032881 -
Sebi96g00047 337 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 151 172 IPR004082 -
Sebi96g00047 337 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 197 217 IPR004082 -
Sebi96g00047 337 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 270 289 IPR004082 -
Sebi96g00047 337 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 151 327 IPR004082 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi96g00047 Sebi-Chr96 839471 840716 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi96g00047 160 288 PHD Gene Family AT5G57380 24.031 2.19e-06 47.4