Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi96g00043 ATGAAAACAGAACAGATTTCAACATGTCTAGAAATTCAATTATACAGTGGTACTGTTCAATTCCCCATAGAATCATCAGGATCAGAGATCTCAAATTTTTCTGGAAGGGTCTTCCAGAGTGAAAAGGTGAAGCTATGGGACAGTCAAAGAGGCATGAAAGTCTCATTCAATTCAACATTTGTTTTCAATATTCAACCTGTAACCTCTCCTGGCGGTGAGGGATTAGCTTTCATATTAGCTGCCAACACCTCTCTTCCAAGTAACAGTGCAGGTCAATGGCTTGGGATGGTCAACTCAACAAGCATAGGGGTAAGTAACATAGTTGCAGTGGAGTTTGACACAAGGAAAAGCTACCCTGAAGATGTTGATGATAACCATGTTGGGGTGGATGCAAAAAGCATCTATTCCATTCAGCAAGAGCCTCTTGGAGCACATGGTGTTAATCTTTCAAGTGGCATTGATGTTATTGCAACAGTTCAGTTTGATGCCAAAGAAGGAAAAATGTCTATTTTTGTTTCTACATTAGGAGACTTGAAGTTGACGACAGCAATGCTTACAGTGGATATTGATCTCTCTAAACTACTTCCAGAAGATGTTTATGTGGGGTTTTCAGCTTCCACAGGGGAGCTTCTATCTGCCACCAAGAATTTCAACTCATCAAACAAGCTTGGCAAAGGAGGATTTGGGACAGTTTATAAAGGCACCTTGAATGGCAAAGATGTTGCTGTGAAAAGGATTTCAAAGGATTCAAGATGGTGCTATGAAAAGGGTGAGCTACTACTTGTGTATGAGTTCATGCCAAATGGAAGCTTAGACAGATTCATTTTCTCTGGAGGAATCAAAACATCTGCAGGGGATTCTACTCTGGGTTGGGAAAGGAGGCTTAGTGTTATATGTGGGGTATCTAGAGCACTGGATTATCTTCACAATGGTTGTGATAAAAGAGTGCTACATAGAGACATAAAACCCAGCAATGTAATGTTGGATTCAGATTTCAATGCTAGACTTGGTGATTTTGGCTTAGCTAGAACCATTCATCTTAGTGAAAAAACTCACCACTCAACAAGAGAAATTGCTGGAACACCAGGATATATAGCACCAGAAAGCTTCCACACTAGAAGGGCTTCTGTCGAAACTGATGTTTATGCATTTGGTGTTCTGATGCTAGAAGTTGTCTGTGGAAGAAGAAAGCTTGAACACAAACAGTATCTGAATAATTATAACAATAGCATTATGGATTGGGTTTGGGAGCTTCACAGTGAAGAAAACATAACTGATGCTGTAGATTTGAGACTGAATGGTGATTTTAATAAGGTTCAAGCTAGGTGTGTGCTTGAGTTGGGGTTAGCTTGTTGCCATCCCAACCCATATGAGAGGCCATCCATGAGAAGTGTCATGCAGGTGCTACAAGGGGAAACAGCTCCACCATTTGTACATGTTGAGAAACCTGCTTTTACATGGCCAGCAATGGCTCCTGTTCTCAAAGAAGAGTTAAATTCACATACTACTGGATCCCAAAATGAACCAATAACAGAACTGATTAGTGGGAGATGA 1554 0.406 MKTEQISTCLEIQLYSGTVQFPIESSGSEISNFSGRVFQSEKVKLWDSQRGMKVSFNSTFVFNIQPVTSPGGEGLAFILAANTSLPSNSAGQWLGMVNSTSIGVSNIVAVEFDTRKSYPEDVDDNHVGVDAKSIYSIQQEPLGAHGVNLSSGIDVIATVQFDAKEGKMSIFVSTLGDLKLTTAMLTVDIDLSKLLPEDVYVGFSASTGELLSATKNFNSSNKLGKGGFGTVYKGTLNGKDVAVKRISKDSRWCYEKGELLLVYEFMPNGSLDRFIFSGGIKTSAGDSTLGWERRLSVICGVSRALDYLHNGCDKRVLHRDIKPSNVMLDSDFNARLGDFGLARTIHLSEKTHHSTREIAGTPGYIAPESFHTRRASVETDVYAFGVLMLEVVCGRRKLEHKQYLNNYNNSIMDWVWELHSEENITDAVDLRLNGDFNKVQARCVLELGLACCHPNPYERPSMRSVMQVLQGETAPPFVHVEKPAFTWPAMAPVLKEELNSHTTGSQNEPITELISGR 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi96g00043 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
Sebi96g00043 517 SUPERFAMILY Protein kinase-like (PK-like) 205 469 IPR011009 -
Sebi96g00043 517 Gene3D Transferase(Phosphotransferase) domain 1 267 475 - -
Sebi96g00043 517 Pfam Legume lectin domain 31 211 IPR001220 GO:0030246
Sebi96g00043 517 Gene3D - 3 215 - -
Sebi96g00043 517 ProSiteProfiles Protein kinase domain profile. 217 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi96g00043 517 CDD lectin_legume_LecRK_Arcelin_ConA 27 210 IPR001220 GO:0030246
Sebi96g00043 517 ProSitePatterns Legume lectins beta-chain signature. 108 114 IPR019825 -
Sebi96g00043 517 ProSitePatterns Protein kinases ATP-binding region signature. 223 244 IPR017441 GO:0005524
Sebi96g00043 517 Gene3D Phosphorylase Kinase; domain 1 216 266 - -
Sebi96g00043 517 SMART serkin_6 217 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi96g00043 517 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 209 IPR013320 -
Sebi96g00043 517 PANTHER - 33 208 - -
Sebi96g00043 517 Pfam Protein kinase domain 252 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi96g00043 517 FunFam probable L-type lectin-domain containing receptor kinase S.5 266 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi96g00043 Sebi-Chr96 769811 771668 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi96g00043 206 487 Receptor kinase-like Gene Family AT5G55830 43.548 1.71e-75 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sebi96g00043 Pkinase 5.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi96g00043 - - gsj:114374599 561.607