Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi96g00006 ATGAATGAGAACAAGATTGATTGTCTAGGACGGATTCAACAAAGCCATGGACTAAATGGTGATTTCAATTCAGAGTTTGGTAATTGTTCTTCTCAATATTTTGATATCAAACAGGCTTCCAATATGGGAACTTGCAATCAACCATTTGTCATGTCCTGTGGTGGAGGAGGAGTGGAACAGCCACCATACATAGGCCAAGGAAAATCATCTAGCACCATTATCAGCCGTTTTGAGTCACCAGCTACTGCCTTTTATGCAACAGAAATCTGCATGGGTTTCCCACAATATGATTGCCAACAAGTTTCTTGTGGTTCATATAATTTACCTGTTTCACAGCTCAGCTTCTCTTCTCAGCAAGAGAAGCTGTCTCCAGCATTCTCTGCAGGAAATGTGTCAACTACTTCTGGAAACCCTGCTTCTAATGGTTCCTCAGTCTCAAGTAAAACACGTATAAGATGGACTCAGGATCTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGAGGTGCTGAGAAGGCAACACCAAAAGCTATATTAAGGCTGATGGAATCAGATGGATTGACCATCTTCCATGTTAAAAGTCATTTGCAGAAATACAGAATTGCGAAATACATGCCAGAGTCAACTCAGGGGAAATCTGACAAAAGAACCCATGTAGAGAATGTGCAACTTGATGTCAAAACTGGCTTACAAATTAGAGAGGCACTTCAGCTGCAGCTAGATGTTCAGAGGCGTCTTCATGAACAGCTAGAGATTCAGAGAAAGTTGCAGTTGCGGATTGAGGAACAAGGTAAGCAGCTGAAGATGATGTTTGACCAACAGCAGAAGACAAGTAATGACCTCTTGAATACTCAGAATTTGAGCAATACAGCCAATAGTGATAAACCAAATAGTCCTAAAGATGTTGAGGATTCCATTTCTGAAGGGTCTGGAAAATCCTTATTCCATTCCAAGATAAGTTAG 966 0.4099 MNENKIDCLGRIQQSHGLNGDFNSEFGNCSSQYFDIKQASNMGTCNQPFVMSCGGGGVEQPPYIGQGKSSSTIISRFESPATAFYATEICMGFPQYDCQQVSCGSYNLPVSQLSFSSQQEKLSPAFSAGNVSTTSGNPASNGSSVSSKTRIRWTQDLHEKFVECVNRLGGAEKATPKAILRLMESDGLTIFHVKSHLQKYRIAKYMPESTQGKSDKRTHVENVQLDVKTGLQIREALQLQLDVQRRLHEQLEIQRKLQLRIEEQGKQLKMMFDQQQKTSNDLLNTQNLSNTANSDKPNSPKDVEDSISEGSGKSLFHSKIS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi96g00006 321 Pfam MYB-CC type transfactor, LHEQLE motif 231 278 IPR025756 -
Sebi96g00006 321 NCBIfam myb-like DNA-binding domain, SHAQKYF class 148 203 IPR006447 GO:0003677
Sebi96g00006 321 Pfam Myb-like DNA-binding domain 152 201 IPR001005 -
Sebi96g00006 321 Gene3D - 147 206 - -
Sebi96g00006 321 MobiDBLite consensus disorder prediction 280 321 - -
Sebi96g00006 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 147 205 IPR017930 -
Sebi96g00006 321 Coils Coil 234 254 - -
Sebi96g00006 321 SUPERFAMILY Homeodomain-like 146 202 IPR009057 -
Sebi96g00006 321 MobiDBLite consensus disorder prediction 126 148 - -
Sebi96g00006 321 FunFam Myb family transcription factor 147 205 - -
Sebi96g00006 321 MobiDBLite consensus disorder prediction 280 297 - -
Sebi96g00006 321 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 128 293 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi96g00006 Sebi-Chr96 70877 73669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi96g00006 131 275 G2-like Transcription Factor Family AT4G28610 60.135 2.74e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi96g00006 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi96g00006 - - gmx:102668541 330.872