Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi968g00001 ATGTCTTTAATACAGAGTGACCTTGTCCAGTCTTCTGCCATGTCAGAGTATGATTTGGCAGCAGAGGGAGATCTATTCAAAGCACCAGAACCTATTATTGAAGAGCCAGTCATGGACCTGGATCCTATGACAGCAGCCATCTCGATGATATCTTGTGGGGAAAATGTCACTTCAGAGGGACTTAAATCCACAGATATTGATATTCTTCAAAATGAACAGTTTCTGAATGAGGTATTCTATGAATGCAAAAAGGATCTCTTAGAAAAGGCAGCAATAGAGTCACCACTCTCTGAGATTCTGGAAATCAAGATTCCTGTTCTGAACATAGATGAGAACTCAATTCTAGAAAACAAGCCACTTCCTGACATGCCATTACCAAAGAGTGACAGTTCAGGAAGTTTGAGCTCAATGGACTGGATGCATGGAGGTGCAATGAACCCTGCTTTCCTTGATATCCCAGGAATAGATTTCAATGCAGTTTATGGCATGCGGAGATCATTTAGTGAAGGAGATATAAAGACTCTTGGTAATGGCAATTTGAACACCGTCCAATCTCCCCTTGAGAGGCCATTTCTTATCAGCAACTGTACCAGTGAGGAACGCCGACAAAAACTCTCCAGATACAGGAACAAGAAGACAAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAAGCTCTTGCAGACAATCAACCAAGAATCCGTGGAAGATTCGCAAGGACTGATGAATCTGAGGCCAAGAGAGAATGA 756 0.422 MSLIQSDLVQSSAMSEYDLAAEGDLFKAPEPIIEEPVMDLDPMTAAISMISCGENVTSEGLKSTDIDILQNEQFLNEVFYECKKDLLEKAAIESPLSEILEIKIPVLNIDENSILENKPLPDMPLPKSDSSGSLSSMDWMHGGAMNPAFLDIPGIDFNAVYGMRRSFSEGDIKTLGNGNLNTVQSPLERPFLISNCTSEERRQKLSRYRNKKTKRNFGRKIKYACRKALADNQPRIRGRFARTDESEAKRE 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi968g00001 251 Coils Coil 242 251 - -
Sebi968g00001 251 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 128 245 IPR045281 GO:0009909
Sebi968g00001 251 Pfam CCT motif 201 243 IPR010402 GO:0005515
Sebi968g00001 251 ProSiteProfiles CCT domain profile. 201 243 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi968g00001 Sebi-Chr968 16934 19049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi968g00001 197 248 C2C2-CO-like Transcription Factor Family AT5G24930 52.830 4.60e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi968g00001 CCT 5.6e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi968g00001 - - gmx:100814332 420.239