Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi95g00087 ATGGCGGTTGTGTCTGGGCAATTCCATACGATTAAAGACATTTTTGAAGGAATGATTTTTTTGAGATTGAAGGTTCGGGTGGTACGTATGTGGAAGAGTTGTTCGAAGAATGAACCTGATAAGCCTTTTGCCATCGAATTGGTCTTCGTGGATGCTGAGGGAGGAAGGATACAAGCTAGCATTCAGAAGCCAATGATGAGGAAGTTTATGAACATTATTGCTGAGGGTGAGGTCTATAAGATGAACTCTTTTTCTATTGTGAAGAATGATGGTATTTATCGGGCAACAAGACATCAATTTAAGCTGATCTTTAATAGTAAGACAAAAGTTTTTCCTGTTGAAAGTCAGTTGATTCCAGAATTTGGATTGTCTTTGGTTTCTTCTGATGTCATCCTTAGCACCAAGGGCGAATCACCTTATTTATTTGATATGATGGGAATACTTACGACTGTCTCTGAGAAAAAAAACATTAAAAAAGAGGGAACTACTACAAGATTTATAGTCCTTGAGTTGGTTGATGATAAGGGCAAGATTAGGTGTGCCCTTTTTGGCGACTATGTAGACATAGTCAAGGAACATCTTGCTATCACTGGTACGGAGTTACCGGTTGTCATTATTCAGTTTGCAAAAGTAAATCTGTATAAGGGTGAAGTTGGATTGATCAATTTGTTTAACACATCAAGGTTGTTATGGAATCCTCAAATCCCGGAGGCAATACAATTCAAACAAAGTCTGGCCGTTCATGAGATTGAAGTGGATTTGGCTATTGGTGATAGTCCTGTGAACATAAGGGGCGATTTTCTGAACTACTTCTCAAGGAAAACTATCGAAGCCTTACAAGTTTGTGAAAAGGATGGATTCTTCATTGTCTTGGGGACTATTACTGCTATCCTAGAAGATGGGAAATGGTCCTATTCAGCATGCAGTTGCAACAAATCAGTGAATGTTCTAAATAAAGAATCTAAAGGAATATTATTGTACTGA 984 0.3811 MAVVSGQFHTIKDIFEGMIFLRLKVRVVRMWKSCSKNEPDKPFAIELVFVDAEGGRIQASIQKPMMRKFMNIIAEGEVYKMNSFSIVKNDGIYRATRHQFKLIFNSKTKVFPVESQLIPEFGLSLVSSDVILSTKGESPYLFDMMGILTTVSEKKNIKKEGTTTRFIVLELVDDKGKIRCALFGDYVDIVKEHLAITGTELPVVIIQFAKVNLYKGEVGLINLFNTSRLLWNPQIPEAIQFKQSLAVHEIEVDLAIGDSPVNIRGDFLNYFSRKTIEALQVCEKDGFFIVLGTITAILEDGKWSYSACSCNKSVNVLNKESKGILLY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi95g00087 327 SUPERFAMILY Nucleic acid-binding proteins 135 249 IPR012340 -
Sebi95g00087 327 Gene3D - 265 323 IPR012340 -
Sebi95g00087 327 CDD RPA1_DBD_B_like 143 245 - -
Sebi95g00087 327 Gene3D - 118 252 IPR012340 -
Sebi95g00087 327 Pfam Domain of unknown function DUF223 46 133 IPR003871 -
Sebi95g00087 327 SUPERFAMILY Nucleic acid-binding proteins 8 115 IPR012340 -
Sebi95g00087 327 Gene3D - 8 115 IPR012340 -
Sebi95g00087 327 CDD RPA1_DBD_A_like 22 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi95g00087 Sebi-Chr95 1788824 1790498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi95g00087 41 314 Core DNA Replication Machinery Family AT2G06510 25.000 4.16e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi95g00087 - - lja:Lj6g3v0884310.1 268.47