Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi95g00023 ATGTCTGTCCAGCAACCATGTGGTGGTGCCCCACCACAAAATATCACAATGGTCGCTGTGGACAAAGACAAGAACAGTGCTTATGCCTTCCGATGGGCCGTCAATCATCTCGATAATCCTTTCATCATCGCTGTCCATGTCAAGCACAAAAACTTTCATAACCAGGGCACAAATGTTTTTCCACCTGACGAAGAAGACGTAGCCCAAATTTTCAGTCCCTTACGCCTAATGTGCAATCGTAAAGTTGTCACGATGAGAGAAGCTGTAGTTGATGATCATGATGTTGTCAAAGGAATTTTAGATTTTGCAAGCAGGAATCCCATACATAGCATCGTCATTGGTGCATCCAACAAGAATCCTTTGACAAGTCTCAAAAAATTTAAAGGCTATCATGATATACCAACAGCAGTGATCAAATCAGCCCCAGAATATTGCTCTGTATACATAATTTCGAAATTGAAGATTGTGTCAGCTCGATCAGCAATACGATCAATGACAAAACAGTTAGTTCCCCCAAAACAGCATCAACCTGTTCAGGCATTCCCACCTAGTGAATCAGAAAGTGGTGGAGGATCAGTAAGGGGACATCCACCTAGAAGTGGGGGCACTCCAGAGGAAGGATCAGAATCAAGGTCTTTTGACAGCATTTATCCAGTAAGAACACAGGTACGTGAGAGGCCAAGGAGTGCGGGAAGTAACCAGTCATTGGACAACATTAATCTACCTGGTCGTGCACGACATTGGTCAATGGATGAGCGAGAGATTTTAGGACTTGTTCCTATTGATAGAGACCTTGAAGCTGAGATGAAAAGATTGAGGCTTGAACTGAAGCAAACTATGGACATGTATAGCTCAGCTTGCAAGCAAGCAATCTCAGCAAAAAATCAGGCTGAACAGATTCGTCGATGGAAAGTGGAAGAGGAACGTAAGGTTGAGGAAGTTAGGATGTCTGAAGAGGCAGCTCTTGCAATTGCAGAAAAGGAGAAGGCAAAAGCCAGAGCTGCAATGGAAGCAGCTGAGGAATCCAGGAGGAAGGCTGAACAGGAAGCACAGAGAAGAAAGGAGGCAGAGATGAAAGCCAGGAGAGAGTCAGAAGAGAAGGATCGAGTATTAACTGCTTTGGCTCAAAATGATTATCGATATAGAAAATACACCATAGAGGAGATTGAAGAAGCTACTGAAAAGTTCTCCCCATCAAAGAAAGTAGGTGAAGGTGGATATGGACCTGTGTACAAAGGCCAACTTGATCACACCCTAGTTGCAATCAAAATTTTAAATCCTGAGGCTTCTCAGGGCAGGAAGCAGTTCCAACAAGAGGTTGAGGTACTAAGCTGCATTAGACATCCGAATATGGTGCTCCTCCTTGGTGCCTGTCCTGAGCATGGATGCTTGGTGTATGAATATATGGATAATGGAAGCTTAGAAGATAGATTATTTCGGAAAAATAACAGCCGGCCTATTTCATGGAGGAAACGGTTCCAAATAGCTGCTGAGATTGCAACTGCACTCCTTTTCCTTCACCAAACAAAGCCAGATCCCATTGTGCACCGAGACCTTAAACCAGCTAACATTCTGTTGGACAGGAACTACGTGACTAAAATCAGCGATGTTGGTCTGGCAAGACTAGTTCCCCCTTCTGTAGCTGATACTGTCACACAATATTACATGACTTCAGCTGCTGGAACCTTTTGTTATATTGATCCTGAGTATCAACAAACAGGAATATTAACACCAAAATCAGATATATATTCGTTGGGGATAATGCTTCTGCAGATAATCACAGCCAAGCCTCCCATGGGTCTTGCTCACCAAGTCAGGAAGGCCGTTGAAAAGGGCAGGCTTTCAGAGATTCTTGACCCTGTGGTGACTGATTGGCCAGTTGAAGAAGCTCTATCTTTTGCCAAATTAGCAGTGAGCTGTTCAGAACTCAGCAAGAAGGACAGGCCAGATCTTGCAACAGTTGTATTACCAGAGCTTAGTCGGTTAAGAGACTTGGGATGCTCTTTACCCATCAATGAAGTTACCTCGCGCCCTCCCACACCTACCTGA 2049 0.4417 MSVQQPCGGAPPQNITMVAVDKDKNSAYAFRWAVNHLDNPFIIAVHVKHKNFHNQGTNVFPPDEEDVAQIFSPLRLMCNRKVVTMREAVVDDHDVVKGILDFASRNPIHSIVIGASNKNPLTSLKKFKGYHDIPTAVIKSAPEYCSVYIISKLKIVSARSAIRSMTKQLVPPKQHQPVQAFPPSESESGGGSVRGHPPRSGGTPEEGSESRSFDSIYPVRTQVRERPRSAGSNQSLDNINLPGRARHWSMDEREILGLVPIDRDLEAEMKRLRLELKQTMDMYSSACKQAISAKNQAEQIRRWKVEEERKVEEVRMSEEAALAIAEKEKAKARAAMEAAEESRRKAEQEAQRRKEAEMKARRESEEKDRVLTALAQNDYRYRKYTIEEIEEATEKFSPSKKVGEGGYGPVYKGQLDHTLVAIKILNPEASQGRKQFQQEVEVLSCIRHPNMVLLLGACPEHGCLVYEYMDNGSLEDRLFRKNNSRPISWRKRFQIAAEIATALLFLHQTKPDPIVHRDLKPANILLDRNYVTKISDVGLARLVPPSVADTVTQYYMTSAAGTFCYIDPEYQQTGILTPKSDIYSLGIMLLQIITAKPPMGLAHQVRKAVEKGRLSEILDPVVTDWPVEEALSFAKLAVSCSELSKKDRPDLATVVLPELSRLRDLGCSLPINEVTSRPPTPT 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi95g00023 682 SUPERFAMILY Protein kinase-like (PK-like) 379 655 IPR011009 -
Sebi95g00023 682 Pfam Protein kinase domain 398 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi95g00023 682 MobiDBLite consensus disorder prediction 337 364 - -
Sebi95g00023 682 Coils Coil 315 367 - -
Sebi95g00023 682 FunFam Os07g0541700 protein 469 558 - -
Sebi95g00023 682 PANTHER OS02G0152300 PROTEIN 16 678 - -
Sebi95g00023 682 SMART serkin_6 396 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi95g00023 682 Pfam Universal stress protein family 17 122 IPR006016 -
Sebi95g00023 682 ProSiteProfiles Protein kinase domain profile. 396 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi95g00023 682 Coils Coil 262 282 - -
Sebi95g00023 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
Sebi95g00023 682 Gene3D Phosphorylase Kinase; domain 1 366 468 - -
Sebi95g00023 682 MobiDBLite consensus disorder prediction 167 218 - -
Sebi95g00023 682 Gene3D HUPs 12 146 IPR014729 -
Sebi95g00023 682 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 369 468 - -
Sebi95g00023 682 CDD STK_N 18 152 - -
Sebi95g00023 682 Gene3D Transferase(Phosphotransferase) domain 1 469 665 - -
Sebi95g00023 682 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 124 - -
Sebi95g00023 682 MobiDBLite consensus disorder prediction 167 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi95g00023 Sebi-Chr95 363452 367532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi95g00023 85 666 Receptor kinase-like Gene Family AT5G12000 59.806 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Sebi95g00023 Pkinase 4.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi95g00023 - - gmx:100798861 935.636