Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi95g00020 ATGGAGAAAGTTGCTGCAGCTAAGAAGTTCATCGAGAATCATTATAGGGCTCAGAGGAAGAACCTCCAAGAACGGAAAGAGAGGCGTTGGGTTTTAGAAAGGAAATTAGCTTCTTCAGATGTGCCAAATGAGGAACGAATCAACCTCATCAAAGATTTAGAGAGGAAGGAAACTGAATATATGCGATTGAAAAGGCACAAGATTTGTGTTGATGATTTTGAGCTTTTGACTATCATTGGAAGAGGGGCTTTTGGGGAGGTTAGACTGTGTCGGGAGAAGAAATCTGGAAATATTTATGCCATGAAAAAGCTGAAGAAATCTGAAATGCTTAAGAGAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACTTGCTGGCTGAAGTTGCCAGTCATTGCATTGTGAAACTTTACTACTCATTTCAGGATGCTGACTACTTGTATTTAATTATGGAGTATCTGCCTGGGGGTGATGTTATGACTCTGCTGATAAGGGAAGACACCTTAAGTGAAGATGTTGCTAGGTTTTACATTGCACAGAGTGTTATGGCCATAGAGTCTATTCACAAACACAATTACATTCACAGGGATATTAAACCTGATAACCTACTTCTGGATAAAAATGGTCACATGAAGCTCTCTGATTTTGGCCTCTGTAAGCCTATCGACTGTATTACCCTGTCTACACTGCATGAAAATCAGACCATGGATGATGAAACTTCGGCAGAGCCAATGGATATCGATGGACGTGTTCCGGATGCGGACAATCGAAGCAGCTGGAGAAGTCCACGGGAACAGCTTCAGCACTGGCAGATGAACAGGAGGAAGTTGGCATTTTCAACAGTGGGAACACCAGACTACATTGCTCCTGAAGTACTTTTGAAAAAAGGATATGGAATGGAATGTGATTGGTGGTCACTGGGAGCAATATTGTATGAAATGCTGGTTGGTTACCCTCCATTTTACTCTGATGACCCAATAACCACATGCAGAAAGATTGTTCATTGGAGAAATCATTTAATATTTCCAGAAGACGCCCAGATAACACTTGAGGCTAAGGATCTAATCTACAGATTGCTGTGTGATGTTGATCATAGGTTAGGTACTCGAGGGGCACATGAAATCAAGGCTCATCCTTGGTTCAAGGGTGTACAGTGGGATAAACTTTATGAAATGGAGGCAGCATTTAAACCACAAGTCAATGGGGAGCTGGATACCCAAAACTTCATGAAATTTGATGAGGTGGATCCACCAGCAGCAGCAAGAACTGGGTCCGGATCCTCAAGAAAGATGCTTCTAACTCCCAAAGATTTGAACTTTGTTGGTTACACTTACAAGAACTTCGATGCTGTAAAAGAAGGGCTTCGTCAATCTTTTGGTGATTCCATGCAAGATTATGCTTCTAAACGGGCAGCTGAGGAAACAGGTTTACCAATGCTTGCATCGTCTGGAGATCCCATGTTGCCATAA 1467 0.424 MEKVAAAKKFIENHYRAQRKNLQERKERRWVLERKLASSDVPNEERINLIKDLERKETEYMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDADYLYLIMEYLPGGDVMTLLIREDTLSEDVARFYIAQSVMAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPIDCITLSTLHENQTMDDETSAEPMDIDGRVPDADNRSSWRSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAILYEMLVGYPPFYSDDPITTCRKIVHWRNHLIFPEDAQITLEAKDLIYRLLCDVDHRLGTRGAHEIKAHPWFKGVQWDKLYEMEAAFKPQVNGELDTQNFMKFDEVDPPAAARTGSGSSRKMLLTPKDLNFVGYTYKNFDAVKEGLRQSFGDSMQDYASKRAAEETGLPMLASSGDPMLP 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi95g00020 488 SMART pkinase_C_6 381 446 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sebi95g00020 488 SUPERFAMILY Protein kinase-like (PK-like) 56 424 IPR011009 -
Sebi95g00020 488 FunFam Non-specific serine/threonine protein kinase 34 156 - -
Sebi95g00020 488 PANTHER SERINE/THREONINE-PROTEIN KINASE 2 418 - -
Sebi95g00020 488 MobiDBLite consensus disorder prediction 234 259 - -
Sebi95g00020 488 FunFam Non-specific serine/threonine protein kinase 399 409 - -
Sebi95g00020 488 FunFam Non-specific serine/threonine protein kinase 279 398 - -
Sebi95g00020 488 MobiDBLite consensus disorder prediction 469 488 - -
Sebi95g00020 488 Pfam Protein kinase C terminal domain 399 444 IPR017892 GO:0004674|GO:0005524|GO:0006468
Sebi95g00020 488 CDD STKc_NDR_like 71 445 - -
Sebi95g00020 488 ProSiteProfiles Protein kinase domain profile. 73 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi95g00020 488 FunFam Non-specific serine/threonine protein kinase 157 224 - -
Sebi95g00020 488 SMART serkin_6 73 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi95g00020 488 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Sebi95g00020 488 MobiDBLite consensus disorder prediction 242 259 - -
Sebi95g00020 488 Pfam Protein kinase domain 74 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi95g00020 488 Pfam Protein kinase domain 272 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi95g00020 488 Gene3D Transferase(Phosphotransferase) domain 1 159 397 - -
Sebi95g00020 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Sebi95g00020 488 CDD MobB_NDR_LATS-like 7 68 - -
Sebi95g00020 488 Gene3D Phosphorylase Kinase; domain 1 64 158 - -
Sebi95g00020 488 ProSiteProfiles AGC-kinase C-terminal domain profile. 381 454 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi95g00020 Sebi-Chr95 317568 326032 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi95g00020 1 487 AGC Kinase Gene Family AT4G33080 79.755 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Sebi95g00020 Pkinase 2.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi95g00020 K08790 - gmx:100815717 935.25