Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi95g00015 ATGACAGACAAAAATCAAGGACCACCAGATTCACCTGATACCCAATGGCCTTTGGAGCTCTCTGAGCTCTCTGAGTACTTGAAATTTGACAATGATCAATGGCCAGATGATGACCCTGATTCATTTGTTTCTGGGCATGCCCTGAATCAAGACAATCAAACCAATGAAACAGGTGACTTTGGAGGAATAAGAAGCACTAGCAACCTGGTTGAGGGGTCTTCTAGCAGAGAAGTTAGCAGTGAACTTGAGAAGAAGGAAGTTAGAGATAGAGTTGCATTCAAAACCAAGTCAGAGATTGAAATACTGGACGATGGGTTCAGGTGGAGGAAGTATGGAAAGAAGATGGTGAAAAACAGCCCCAATCCAAGGAACTACTACAGATGTTCAGTGGAGGGGTGTCCGGTGAAAAAAAGAGTTGAGAGAGATCGGGATGATCCAAGGTATGTAATAACAACCTATGAAGGCATCCATACTCACCCAAGTGCTTGA 489 0.4376 MTDKNQGPPDSPDTQWPLELSELSEYLKFDNDQWPDDDPDSFVSGHALNQDNQTNETGDFGGIRSTSNLVEGSSSREVSSELEKKEVRDRVAFKTKSEIEILDDGFRWRKYGKKMVKNSPNPRNYYRCSVEGCPVKKRVERDRDDPRYVITTYEGIHTHPSA 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi95g00015 162 MobiDBLite consensus disorder prediction 45 76 - -
Sebi95g00015 162 Gene3D WRKY domain 89 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi95g00015 162 Pfam WRKY DNA -binding domain 103 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi95g00015 162 MobiDBLite consensus disorder prediction 30 84 - -
Sebi95g00015 162 ProSiteProfiles WRKY domain profile. 97 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi95g00015 162 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 52 160 IPR044810 GO:0003700
Sebi95g00015 162 FunFam WRKY transcription factor 57 88 162 - -
Sebi95g00015 162 SUPERFAMILY WRKY DNA-binding domain 95 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi95g00015 162 SMART WRKY_cls 102 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi95g00015 Sebi-Chr95 209511 210364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi95g00015 2 161 WRKY Transcription Factor Family AT5G26170 49.133 9.59e-48 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi95g00015 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi95g00015 - - gmx:100819462 243.432