Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi955g00005 ATGAAGGGAGTGAACAAGGAGGAGGAGGAAGAATTGCTTGGGCAAATTGAAATATGGAAGTACATGTTAAGCTTCACCGATTCTGTTGCACTGAAATGTGTTGTCGAGCTGCGCATAGCTGACATAATAGACCGTTATGGTAAACCACTATCCTTGGCCCAAATTGCAGCAAACATTGAAGATGCACCCACTCCTGAACTTGCCCTGCTGCAAAGAGTCATGAGAGTAATGGTGCGCAGAAAGATCTTCAGTGCAGAGAAGTCAGAGAGCGGAGAGACACTTTATGGCATGACACGTGCTTCCACATGGATCTTAAGGGACACCAAAATGACCTTGGCACCCATGTTGTTGCTAGAGAACCACCCAATCCATTTGAACCCTGCTCACTACATTAGTGACTGTGTCAGAGAAGGTTACAAAAATGGCACTCCTTTCTTTAGGTGCCATGGTCATGATCAATTTGAAATGACTGGGTTGGACGCAGATTACAACAGGTTATTCAACGAGGGAGGTGGCATTGGAGGTTCACTCTCTGAGATTGTGAGAGCCTACCCACACATCAAAGGCATTAACTTTGACTTGCCTCATGTGGTTGCCACCGCACCCAAGTACGATGGAATCACCCATGTTGGAGGAATTGTAGGAAGGCCAATACCAGAGAAGACGGGAAAGGTGATCATTGTGGATCATGTTCTGGATCCAGAAGGGGATGAACCATTTACTGACACTG 730 0.463 MKGVNKEEEEELLGQIEIWKYMLSFTDSVALKCVVELRIADIIDRYGKPLSLAQIAANIEDAPTPELALLQRVMRVMVRRKIFSAEKSESGETLYGMTRASTWILRDTKMTLAPMLLLENHPIHLNPAHYISDCVREGYKNGTPFFRCHGHDQFEMTGLDADYNRLFNEGGGIGGSLSEIVRAYPHIKGINFDLPHVVATAPKYDGITHVGGIVGRPIPEKTGKVIIVDHVLDPEGDEPFTDT 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi955g00005 243 Gene3D Vaccinia Virus protein VP39 106 240 IPR029063 -
Sebi955g00005 243 SUPERFAMILY "Winged helix" DNA-binding domain 8 107 IPR036390 -
Sebi955g00005 243 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Sebi955g00005 243 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 232 IPR029063 -
Sebi955g00005 243 Pfam O-methyltransferase domain 166 232 IPR001077 GO:0008171
Sebi955g00005 243 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 243 IPR016461 GO:0008168
Sebi955g00005 243 Gene3D - 2 104 IPR036388 -
Sebi955g00005 243 PANTHER O-METHYLTRANSFERASE 18 170 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi955g00005 Sebi-Chr955 232008 233637 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi955g00005 29 238 Monolignol Biosynthesis Gene Families AT5G54160 27.459 1.23e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi955g00005 K22588 - gmx:100800801 364.385