Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi953g00002 ATGGATCCAGAAAGATCAATAGAGGAACAATTCTCCAAGCTACACCCTTCCTTGCCAGTAAACACCAGAATTGGAATAGTTGGTGCTGGTCCAAGTGGCATATCAGCTGCTTATGCACTGGCCAGGCTTGGTTATAATAATATCACCATTTTGGAGAAACACCATACAGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAAAGTTTATGACCTGGGTGGACAAGTTCTGGCTGCAAGCAGTGCTCCAGTCATTTTTCACTTGGCAAAAGAGACAGGGTCTACACTAGAAGAAATGGACTCCCATAAACTAGCTGTTATTGACCATTCCTCAGGACAATATGAAGATGTCAAAGTTGTTGATGATTATGTATCTGTTATGTCACTTACACTGGGAATCCAAGAAAAGGTGAAGAATTCTGGTCGGTTTGGAGTACATGCTGTCAGTGAAATTGCTTCAGACTTAACTCCAGAGTATCTTGAGCATCATGGACTTAAATCAGTTCCTAAATCTGTGGTTTATGGTTACACTGCTTCGGGATTTGGATTTGTTCAAGACATGCCTTATGCCTACATTCATGAATTTACCAGAACCTCCATGGCTGGAAAAATTCGACGATTCAAAAGTGGATATACTAGTCTTTGGCAGAGGCTTGTTGAATCACTTCCTGTAAAACTTCATTGTAATGCTGAAGTGTTGGCAATCAAGCGGAATTCTGACAGTGTCAATATTAATGTCAAGAGCTCAAATGAAATTGAAACTATGGAATTTGATAAGATCATAATCTCTGAGATTGAAACAGAAGTGATGGATGCAAGTGACCTTGAAAAGGAGTTATTCAGCAAAGTAGAGACAATTGATTACTACACCACTGTTTTAAAGATCAAAGGCCTGGAACATATGCCAGTTGGATTTTTTTATTTTAGTGAATATATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCCATGCAGAAGTTTTATGCTGACAGTAACATATTCTTGTTCTGGTCCTATGGCAACTCTGTTGATATTAAGGGACCAACTGTCACTGAGCTTGCAATCAAAGCAATAGAAGCCATGGGGGGAGAGGTTGAGAGTTTTATTCTTCAACGTCGCTTTAAGTATTTTCCTCACATTAGCAGCCAAGATATGAAAAATGGATTCTATGAAAAGTTGGAATCAGAGCTTCAAGGTTCAAGGAATACTTATTATGTTGGTGGGCTTATGGCTTTTGAGCTCACTGAGAGAAATTCATCTTATGCCATGGCTATGATCTGCAAGAACTTTGCAACTAGCAGTGATTTGCCAGTGTTTCCTTATACTAAGAGTTTGTTTCCTTTGCAAACAGAGTTCGAGAGAATGGAGCCTAAAGAACTAGGTGAAATGCCTGGAGTGCAATTTCCCAATTTGCCCACCTTGAATAGCTATTTAAAGCACTGGGGAACTCATCCAGTCACTGAAAACAGAACTCTTTATTCTTGGATAAATGAAGAAGGGACAGTGGTAGGCAACAGGACTTATAGAGAGAAACATTTAAATGCTTCTTGCATTGCACGTAAGCTCTTAACAAGCCAAAAGCCAATTATCAAGCCTGGTGACACGGTTCTACTAGTCTATGTTCCTGGTCTAGATTTCATTGATGCCTTCTTTGGATGCCTAAGAGCTAAAGTTTTACCAGTCCCTGTGCTTCCCCCTGATCCCATGCAAAGAGGTGGACAAGCACTTCTCAAAATTGAGAATATTGCCAAGTCATGTGGCATAGTGGCAATTTTATCAACAGTAGCTTATCACTCAGCAGTCCGTGCAGGTTTAGTGAAAAGTTTTATCTCATTAACTGGGAAAAATGGGAAATCCACAGCTAGATGGCCTAATCTTCCTTGGCTGCACACTGATTCTTGGGTCAATAACTCAAAAAGTTCTGCTATGGAAGATCTTGATGATCAATGTGAATCTCAGCCTGGTGATATATCTTTCTTGCAATTTACCTCAGGTTCAACAGGTGATGCTAAAGGAGTTATGATTACTCATGGGGGGCTTATTCATAATGTGAAGTTGATGAGAAGTAGATACAAGAGCACCTCAAGGACAGTGCTAGTGAGCTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTTAGTGGTGGATCTGCAGTGTTGTTTTCACCAATGACTTTTATCAAGAAACCACTATTGTGGCTTGAAACCATCAGCAAGTATCAAGCAACTCATAGTGCTGGTCCTAACTTTGCTTTTGAGATGGTGGTTAGAAGGTTAGAATCTGAAAAGGATAGGCTTCAGAATTTAGACCTTTCATCCATGGTTTTTCTTATGGTTGCTGCTGAACCAGTAAGGCAGAAGACTCTGAGAAAGTTTCTTGAGCTAACCAGTCCTTTTGGCTTATCTCAAAAGGTGATGGCTCCTGGATATGGCTTAGCAGAAAACTGTGTGTTTGTCAGTTGTGCATTTGGAGAAGGCAATCCTATTCTGGTTGATTGGCAGGGAAGAGTTTGCTGTGGATATATTCACCCAGGGAATGCAGATATTGACATTAGAATAGTTGATCCAGAGCTTGGTGAAGAGCTTAAGGAAGATGGAAGGGAAGGAGAAATCTGGATCAGTAGTCCAAGTTCAGGAATAGGATACTGGGGAAAGGAAGAATTGAGTCAGAAAACTTTCAGAAATGAGCTCAAGAACCATCCTGGACGTATCTACACAAGAACTGGAGACTTGGGAAGAATAATAGATGGAAAGCTATTCATCACTGGAAGAATCAAGGATCTTATCATTGTTGCTGGAAGAAATATCTACTCCTCAGATGTTGAAAAGACAGTTGAGAGTTCATCTGAATTTCTTCGTCCTGGGTGCTGTGCTGTCATTGGTGTCCCTGAGGAAATTTTATCAACAAAAGGGATTTCCTTGCCAGAAGGATCTGACCAGGTTGGCTTGGTTGTGATTGCAGAAATAAGGGATGGTTCTAAACCAGTTAGCAAAGATGTGATTGAGCATATTCAGACTCGTGTAGCAGAAGAACATGGAGTCAATGTTGCTTCTGTCAAGTTGATCAAGCCTAGAACCATCAGCAAAACAACATCAGGAAAAATCAAGAGATTTGAATGTCTCAAACAGTTCTCAGATGGAACACTGAACTTGGTACCACAACCTATTTTGACAAAGAAATCACTGTCTGGAATCCCAATCAGCAACATCTCAGTCACAGACAACATGTCATCCTATGGAATTGATTCAATTGGTGTGGTTAAAGCAACTCAAAAGCTCTCAGATTTCCTGGGCGTGCCAGTTGCTGCTATAGATGTTTTCAGTGCATCCTGCATTCAAGAATTGGCTAACTTCTCAGAGAATCTTCTATTGAAGTCTCAACCTCAACTTATGAGCAATCCATCCCATGCTCCAGAAGCTGAAATTGATTCTACTGAATTGGTTGTGGATGTGTCCAAGTCTCGCCAATGGGGTATCCATTTACTTCAACTCCTAGCACTTATTTACATTTCTATCATGCTGGTCTCTCCTGCTTATCTATCCATCACTGCTTTTCTAAGTTTCATCCCAAATGAAATTTCTTCAAAGGTTCTGGCAATACACCTCAAAGGAACAGTGTTTCTGAAATACTGGTTTGAGATGCTTGGTGCAAGAATAGGATCCTCAGTTTTGCTTGACACAGTTGACATCACAGACCCATCTTTGGTTTCAATTGGAGATGAAGTTGTCATTGCCGAAGGGGTTTTGGTTCAAAGTCATGAGGTGAAGAATGGACTTCTAAGTTTCCTTCCTATTAGGATCAGCAGAAATTCTTCAATCGGACCTTATGCTGTTATTCAAAAAGGAAGTGTTATTAAAGAAGGAGCTGAGGTACAACCCCTGCAAAAGGTTGAAGCAGGCCAACATGTGCTCAAACCTTCCAAGCTTAATAATGTTAAAGAGAATACAGGGCTGCTTGTTACTACCAGCAAAACTCACTCTAATGCTATGTACCACTTTCTGGGGATTTATCTTGTTGGCTTTCTGAGCTCCCTTGCTGCAGCTATTGCTTACTTCCTGTATATAAAGTTCTTGCAGAAACCAGCATCATTCCAACACTTCTCATTTGTTTGCTTATGTGGGGCCTTCCACTGGATCCCATTTACCATTATTGCATATGCTACCATGTTTTCTGATGTCCCATCAAATCCCATTGCCTTTGCCATTTCATTTACATGTGCATACCTGCTTCATGGTCTCATACTCAGCTCACTCACCTTTGCTTTGACTCATATGCTCAAATTCAGTCAAAAGAAAACCCAGTATAAAACCTGGCTTAGCCACCAACTTACCATTTCCTGCCACCTTAGATTTGCAAAGCTTCTGACAGGAACCGAAGCCTTCTGCATATATTTACGCCTTTTGGGTGCAAAAATTGGCAAGCATTGTTCCATTAGAGCCATCAACCCAGTTTCAAACCCAGAGTTAATGTCAATTGGTGATGGTGTCCATCTTGGTGATTTTAGCAGGATCATCACTGGTTTCCATTATTCCGATGGTTATGCTTGTGGAAAAGTAGAGGTTCAGGATAATTCAGTTGTAGGGAGTCAAAGCCTAATTCTCCCTGGTTCTCTTGTAGAAAAGAATGTCATTTTAGGTGCACTCTCAGTTGCTCCAATGAATTCTATACTCCATGAGGGTAGTGTCTACATTGGATCTCAAACCAGAGTTGCTACCAGAAACTCTGGACATGCTTTGGATGAAAGGATAGAGGAGATGGACATGGCATACAAGAAAGTAGTTGGAAATTTGGCTGCAAATTTAGCAGTCACAACTATGAATGCTAAAGCAAGATACTTCCATCGCATTGGTGTTAGTGGAAAAGGGTACTTAAAAATCTATAACAAGCTTGATGGCATGCCACTGCACAAGATTTTTCACCCTGGAAAGAGCTACCCTGTCATGGTAAGGCATAGTAATAGCTTGAGTGCGGATGATGATGCAAGGATTGATGCACGTGGTGCAGCTTTGAAGATACTCTCTGATGCACCTAGTTCTGATTCTTCTCTCTTTGACTTGACACTGAAAACTGGCAATGCATTTTATGCTCGCACTCTTGCTGATTTTGCAAGCTGGCTTGTGTGTGGACTTGCTGCAAGGGAAGAACTAGTCAAGGGTGCCCCACATGTTCGTGAAGCAGTGTGGAATTCCCTTAGACATGCTAACTCTTATGCTGAATTGCATTACTACTCAAACTTTTGCAGGCTCATGCGGTTCCAAGATGGACAAGAAATGTATGTGAAATTCAAGTTAAGGCCTTATGACACAAGTATCAATGAGGACACTGGTAAGGTTAAGCCAACTGGGATTCTTCCACCAGAGACAGGTGCAATTCCTAGAGATGAAAAGGATTCACGTCCTTTGCTTTTCCTTGCTGATGATTTCCAAAACCGTGTGAGTTCCCCTGGTGGAGTTCACTATGTTTTTCAGATGCAACTTCGACCAGTGCCAGATGATGAAGCCACACGTGAAATTGCATTGGATTGTACTAAACCATGGGATGAAAATGAATTTCCTTATATTGATGTTGGAGAGATCAATATCAATGAAAACCTTTCTAAGGAAGAGACAGAGAAGCTTGAGTTTAATCCTTATCTCAGAAGCAATGAGTTAGATGTCATCCCTGCTACTTCCAACACACAAAGTGCTTCAATTGATCATGGCCGTTCATTGATCTATGAGATTTGCCAGCATGTGCGTAATAGACAACCACTCCCAGAAGCTTGGAGGAACCTTGTACAACAATCTAATGTGAAGGTAGACTTGTCCTGTTGTCCAATTGCAGCTGCAACATCATTGCCTGAAAAAGAACCATTGCTGAAAAAAGTGACCTTGACAAGAACATGGTATCAGACCTTCTCAGCAGTCTTCACTCAGCCATTTTTACAAACAGTTTTACCTCACATTCTGGTGGGGTTATCTATTTTTGCTCCTTTGAACTTGGTTTTTTACCTGAAGGATGTCAAGAAACTCCCTTTGCATTGGTTGCATCCATTGTTTTGGGTTCTCTCAGGTGGTGTGGCTGCATTGGCATGTGTTGTAGCCAAATGGGTTCTTGTGGGAAAGAAGAAAAATGGTGAAACAGTACCCATATGGAGCAAAAGGATTGTCATGGATAGCACATGGCAGGCCATTAGAACCTTAATTGGAGATTATTTTATGGACATGGCAAGTGGGTCAGTTTTGTATGTTTTGTGGATGAAGTTGATGGGTGCTGACATAGACATGGATCATGCTGCTTATGTGGATAGCATGGGAGCATTGTTGAACCCTGAAATGGTGAAGATTGAGAGAGGGGGTTGTGTGGGAAGAGAAGCATTGCTATTTGGACATATATATGAAGGTGAAGGAGGGATGGTGAAGTTTGGAGAGATCAAAATTGGTGAAGATGGGTTTGTGGGGAGCAGAGCTGTGGTTATGCCTGGTGTGCAAGTGGAGAATGAGGCCAATCTTTGTGCCTTATCTCTTGCCATGAAAGGAGAAATCGTTAGATCAAGATAA 6564 0.4127 MDPERSIEEQFSKLHPSLPVNTRIGIVGAGPSGISAAYALARLGYNNITILEKHHTVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETGSTLEEMDSHKLAVIDHSSGQYEDVKVVDDYVSVMSLTLGIQEKVKNSGRFGVHAVSEIASDLTPEYLEHHGLKSVPKSVVYGYTASGFGFVQDMPYAYIHEFTRTSMAGKIRRFKSGYTSLWQRLVESLPVKLHCNAEVLAIKRNSDSVNINVKSSNEIETMEFDKIIISEIETEVMDASDLEKELFSKVETIDYYTTVLKIKGLEHMPVGFFYFSEYMEDPSTIGNPVAMQKFYADSNIFLFWSYGNSVDIKGPTVTELAIKAIEAMGGEVESFILQRRFKYFPHISSQDMKNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMAMICKNFATSSDLPVFPYTKSLFPLQTEFERMEPKELGEMPGVQFPNLPTLNSYLKHWGTHPVTENRTLYSWINEEGTVVGNRTYREKHLNASCIARKLLTSQKPIIKPGDTVLLVYVPGLDFIDAFFGCLRAKVLPVPVLPPDPMQRGGQALLKIENIAKSCGIVAILSTVAYHSAVRAGLVKSFISLTGKNGKSTARWPNLPWLHTDSWVNNSKSSAMEDLDDQCESQPGDISFLQFTSGSTGDAKGVMITHGGLIHNVKLMRSRYKSTSRTVLVSWLPQYHDMGLIGGLFTALVSGGSAVLFSPMTFIKKPLLWLETISKYQATHSAGPNFAFEMVVRRLESEKDRLQNLDLSSMVFLMVAAEPVRQKTLRKFLELTSPFGLSQKVMAPGYGLAENCVFVSCAFGEGNPILVDWQGRVCCGYIHPGNADIDIRIVDPELGEELKEDGREGEIWISSPSSGIGYWGKEELSQKTFRNELKNHPGRIYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSSDVEKTVESSSEFLRPGCCAVIGVPEEILSTKGISLPEGSDQVGLVVIAEIRDGSKPVSKDVIEHIQTRVAEEHGVNVASVKLIKPRTISKTTSGKIKRFECLKQFSDGTLNLVPQPILTKKSLSGIPISNISVTDNMSSYGIDSIGVVKATQKLSDFLGVPVAAIDVFSASCIQELANFSENLLLKSQPQLMSNPSHAPEAEIDSTELVVDVSKSRQWGIHLLQLLALIYISIMLVSPAYLSITAFLSFIPNEISSKVLAIHLKGTVFLKYWFEMLGARIGSSVLLDTVDITDPSLVSIGDEVVIAEGVLVQSHEVKNGLLSFLPIRISRNSSIGPYAVIQKGSVIKEGAEVQPLQKVEAGQHVLKPSKLNNVKENTGLLVTTSKTHSNAMYHFLGIYLVGFLSSLAAAIAYFLYIKFLQKPASFQHFSFVCLCGAFHWIPFTIIAYATMFSDVPSNPIAFAISFTCAYLLHGLILSSLTFALTHMLKFSQKKTQYKTWLSHQLTISCHLRFAKLLTGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSRIITGFHYSDGYACGKVEVQDNSVVGSQSLILPGSLVEKNVILGALSVAPMNSILHEGSVYIGSQTRVATRNSGHALDERIEEMDMAYKKVVGNLAANLAVTTMNAKARYFHRIGVSGKGYLKIYNKLDGMPLHKIFHPGKSYPVMVRHSNSLSADDDARIDARGAALKILSDAPSSDSSLFDLTLKTGNAFYARTLADFASWLVCGLAAREELVKGAPHVREAVWNSLRHANSYAELHYYSNFCRLMRFQDGQEMYVKFKLRPYDTSINEDTGKVKPTGILPPETGAIPRDEKDSRPLLFLADDFQNRVSSPGGVHYVFQMQLRPVPDDEATREIALDCTKPWDENEFPYIDVGEININENLSKEETEKLEFNPYLRSNELDVIPATSNTQSASIDHGRSLIYEICQHVRNRQPLPEAWRNLVQQSNVKVDLSCCPIAAATSLPEKEPLLKKVTLTRTWYQTFSAVFTQPFLQTVLPHILVGLSIFAPLNLVFYLKDVKKLPLHWLHPLFWVLSGGVAALACVVAKWVLVGKKKNGETVPIWSKRIVMDSTWQAIRTLIGDYFMDMASGSVLYVLWMKLMGADIDMDHAAYVDSMGALLNPEMVKIERGGCVGREALLFGHIYEGEGGMVKFGEIKIGEDGFVGSRAVVMPGVQVENEANLCALSLAMKGEIVRSR 2187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi953g00002 2187 ProSitePatterns Phosphopantetheine attachment site. 1086 1101 IPR006162 -
Sebi953g00002 2187 SUPERFAMILY ACP-like 1070 1142 IPR036736 -
Sebi953g00002 2187 Pfam Flavin containing amine oxidoreductase 32 263 IPR002937 GO:0016491
Sebi953g00002 2187 Gene3D - 934 1062 IPR045851 -
Sebi953g00002 2187 Pfam AMP-binding enzyme 507 939 IPR000873 -
Sebi953g00002 2187 SUPERFAMILY Trimeric LpxA-like enzymes 1210 1305 IPR011004 -
Sebi953g00002 2187 Gene3D - 284 377 - -
Sebi953g00002 2187 PRINTS Adrenodoxin reductase family signature 23 45 - -
Sebi953g00002 2187 PRINTS Adrenodoxin reductase family signature 47 60 - -
Sebi953g00002 2187 Gene3D - 94 202 - -
Sebi953g00002 2187 Gene3D Catalase core domain 1579 1930 - -
Sebi953g00002 2187 Gene3D - 1068 1130 IPR036736 -
Sebi953g00002 2187 SUPERFAMILY Acetyl-CoA synthetase-like 474 1059 - -
Sebi953g00002 2187 Gene3D Hexapeptide repeat proteins 1447 1578 - -
Sebi953g00002 2187 Gene3D - 23 427 IPR036188 -
Sebi953g00002 2187 ProSitePatterns Putative AMP-binding domain signature. 661 672 IPR020845 -
Sebi953g00002 2187 SUPERFAMILY FAD/NAD(P)-binding domain 21 263 IPR036188 -
Sebi953g00002 2187 Gene3D - 462 933 IPR042099 -
Sebi953g00002 2187 Gene3D Hexapeptide repeat proteins 1223 1330 - -
Sebi953g00002 2187 SUPERFAMILY Trimeric LpxA-like enzymes 1471 1593 IPR011004 -
Sebi953g00002 2187 Pfam Phosphopantetheine attachment site 1070 1126 IPR009081 -
Sebi953g00002 2187 ProSiteProfiles catalase family profile. 1576 2187 IPR018028 GO:0004096|GO:0006979|GO:0020037
Sebi953g00002 2187 SUPERFAMILY Trimeric LpxA-like enzymes 2046 2180 IPR011004 -
Sebi953g00002 2187 SUPERFAMILY Heme-dependent catalase-like 1551 1922 IPR020835 GO:0020037
Sebi953g00002 2187 CDD FAAL 487 1054 IPR040097 GO:0008610
Sebi953g00002 2187 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 134 1941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi953g00002 Sebi-Chr953 22407 30130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi953g00002 657 972 Monolignol Biosynthesis Gene Families AT1G20480 27.445 8.10e-21 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi953g00002 - - pcin:129313184 3417.48