Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi94g00128 ATGGAAGAGACAGAGGAGTCAACCAATGCTAATCAGAAATTCACTACCAAAAGAAGAAGCTTCAGGAATGGAGCCAACTCTCATGAACATCATCACTATCAGCACCATCAGTTGCTACAATACTCAACTCAGCTTGGGTTCTGCAACAACCAGAACAAGTATCAGAGGTACTACCCAGCTCTTCTTCCTCTACCTTCTCTTATACCTCTCCAACAACTACCTTTGACTCCACCCTTCCCTCAAAACCAGACCATCAAATCAAAAACCCATTTGCAGAAACCTCCATGCAAACTCAATAGTTCTCCTTCCTCTGATTACAAGCTCTCTGAACCACCACTTGCTCCTGCTCCAAAGGAACTTCAGCAGCAAACAAAGGCATCCTTTAACGGAGGTGATGGTAAGAAACTGATTCCACCAAGGAAGCCACAGGCAGCAATTGTTGCAAGGAGGCCAGACTCTGGTGGCAAAGAAGGTTCTGTGATCTCTCTCCTTGCCAACCACTTTTTGGTGCAATTTGATCCATCACAAAAAATATATCATTACAATGTTGAAATCACTCCTCATCCCTCCAAGGATATTGCTAGAGTAATCAAACAGAATTTGGTAAATAACAATTCTGCTGTACTCTCGGGTGCTATTCCGGCATATGATGGGAGGAAGAATCTTTACAGCTCAATTGAATTCCAAAATGATAAGCTTGAGTTCTACATAAGCCTCCCAATCCCCACTAGCAAATTGACATCACCATATGGAGAAATGTATGACTTGAAAGAGAAGCATGAACAGCTTAAACTGTTCCGGATAAATATCAAACTAGTCTCAAAGATTAATGGGAAGGAATTGAATAACTACTTGAGCAAAGAGGGTGATGACTGGATTCCACTTCCACAGGATTATCTACATGCTTTGGATGTAGTTCTGAGGGAAAGTCCAACAGAGAAATGTATACCTGTAGGGAGGTCATTCTATTCAAGTTCAATGGGAAGAAGCAAAGATATTGGTGGAGGAGCTGTTGGATTGAGAGGCTTCTTTCAGAGTCTTAGACCAACACAACAAGGACTTGCTCTCAATGTGGATTTCTCAGTAACTGCTTTCCATGAGAGCATAGGAGTCATTCCATACTTGCAGAAACGTCTTGAGTTTCTTCGAGACCTTTCTCAAAGGAAGACAACTCAATTAACTGGTGAAGAAAGGAAGGAAGTGGAGAAGGCATTGAAGAACATAAGGGTCTTTGTTTGCCATAGAGAAACTGTTCAGAGATACCGTGTCTATGGCTTAACAGAGGAGACTACTGAAAATCTTTGGTTTGCTGACAGAGATGGCAAGAATCTGAGGCTTGTGAATTACTTTAAAGATCACTATAACTATGACATACAATTCAGGAAATTGCCATGCTTGCAAATTAGTAGGAGTAAACCTTGTTATCTCCCTATGGAGCTATGTGTGATCTGTGAAGGCCAGAAATTCCTTGGGAGATTGTCTGATGATCAGACAGCAAGAATACTCAAGATGGGCTGCCAAAGACCAGGAGAACGAAAAACCATCATTGAAGGAGTCGTGAGAGGAACTGTTGGGCCTACAAGTGGTGACCAGGAAAGAGAATTCAAACTCCAAGTCTCTAGAGAAATGACAAGGTTGACTGGGAGAATTCTTCACCCTCCTAAACTAAAGCTTGGAGATGGAGGTCATGTGAGAAACCTGACTCCTTCACGTCATGACCGTCAGTGGAACCTTCTGGATGGCCATGTTGTTGAAGGAGCTACAATTGAAAGGTGGGCACTAATAAGCTTTGGTGGCACACCTGAGCAGAAGTCCAATATCCCCAGATTCATAAACCAGTTATCTCAAAGGTGTGAACAATTGGGTATTTTTCTTAATAAGAACACAGTTATTAGTCCCCAGTTTGAGTCAAGCCAGGTTCTTAACAATGTCACCCTTTTGGAATCTAAGCTCAAGAGAATCCAGAGGACTGCCTCAAACAATCTCCAGCTTCTTATTTGTATAATGGAGAGAAAACACAAAGGGTATGCAGACTTGAAACGAATTGCTGAGACAAGTGTTGGTGTTGTAAGCCAATGCTGCCTGTACCCAAATCTCAGCAAGTTAAGTTCACAATTTTTGGCTAATTTAGCCCTCAAAATCAATGCCAAAGTTGGTGGATGCACAGTTGCTTTGTACAACTCACTGCCTTCTCAAGTACCAAGGCTCTTTCGGATTGATGAGCCAGTGATATTCATGGGAGCTGATGTGACACATCCTCATCCTCTTGATGATTCCAGTCCTTCTGTTGCTGCTGTTGTTGGTAGCATGAATTGGCCTACAGCAAATAAATACATTTCAAGAATAAGGTCTCAAACACATAGACAAGAAATTATCCAGGATCTTGGTGCAATGGTAGGGGAATTGCTTGATGATTTTTATCAGGAAGTAGAGAAACTCCCCAACAGAATAATTTTCTTCAGAGATGGG 2469 0.4196 MEETEESTNANQKFTTKRRSFRNGANSHEHHHYQHHQLLQYSTQLGFCNNQNKYQRYYPALLPLPSLIPLQQLPLTPPFPQNQTIKSKTHLQKPPCKLNSSPSSDYKLSEPPLAPAPKELQQQTKASFNGGDGKKLIPPRKPQAAIVARRPDSGGKEGSVISLLANHFLVQFDPSQKIYHYNVEITPHPSKDIARVIKQNLVNNNSAVLSGAIPAYDGRKNLYSSIEFQNDKLEFYISLPIPTSKLTSPYGEMYDLKEKHEQLKLFRINIKLVSKINGKELNNYLSKEGDDWIPLPQDYLHALDVVLRESPTEKCIPVGRSFYSSSMGRSKDIGGGAVGLRGFFQSLRPTQQGLALNVDFSVTAFHESIGVIPYLQKRLEFLRDLSQRKTTQLTGEERKEVEKALKNIRVFVCHRETVQRYRVYGLTEETTENLWFADRDGKNLRLVNYFKDHYNYDIQFRKLPCLQISRSKPCYLPMELCVICEGQKFLGRLSDDQTARILKMGCQRPGERKTIIEGVVRGTVGPTSGDQEREFKLQVSREMTRLTGRILHPPKLKLGDGGHVRNLTPSRHDRQWNLLDGHVVEGATIERWALISFGGTPEQKSNIPRFINQLSQRCEQLGIFLNKNTVISPQFESSQVLNNVTLLESKLKRIQRTASNNLQLLICIMERKHKGYADLKRIAETSVGVVSQCCLYPNLSKLSSQFLANLALKINAKVGGCTVALYNSLPSQVPRLFRIDEPVIFMGADVTHPHPLDDSSPSVAAVVGSMNWPTANKYISRIRSQTHRQEIIQDLGAMVGELLDDFYQEVEKLPNRIIFFRDG 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi94g00128 823 Gene3D - 550 726 - -
Sebi94g00128 823 Pfam Piwi domain 665 823 IPR003165 GO:0003676
Sebi94g00128 823 FunFam Argonaute 10 550 726 - -
Sebi94g00128 823 SUPERFAMILY PAZ domain 363 521 IPR036085 GO:0005515
Sebi94g00128 823 FunFam Protein argonaute 7 363 489 - -
Sebi94g00128 823 MobiDBLite consensus disorder prediction 79 145 - -
Sebi94g00128 823 Pfam PAZ domain 379 501 IPR003100 GO:0005515
Sebi94g00128 823 Pfam N-terminal domain of argonaute 161 307 IPR032474 -
Sebi94g00128 823 ProSiteProfiles PAZ domain profile. 376 485 IPR003100 GO:0005515
Sebi94g00128 823 ProSiteProfiles Piwi domain profile. 664 823 IPR003165 GO:0003676
Sebi94g00128 823 Pfam Argonaute linker 1 domain 317 366 IPR014811 -
Sebi94g00128 823 SMART DUF1785_2 316 368 IPR014811 -
Sebi94g00128 823 CDD PAZ_argonaute_like 372 484 - -
Sebi94g00128 823 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 139 823 - -
Sebi94g00128 823 SUPERFAMILY Ribonuclease H-like 649 823 IPR012337 -
Sebi94g00128 823 Gene3D - 737 823 IPR036397 GO:0003676
Sebi94g00128 823 Gene3D paz domain 362 489 - -
Sebi94g00128 823 SMART PAZ_2_a_3 376 507 IPR003100 GO:0005515
Sebi94g00128 823 MobiDBLite consensus disorder prediction 79 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi94g00128 Sebi-Chr94 1985823 1989961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi94g00128 103 823 Eukaryotic Initiation Factors Gene Family AT1G48410 37.517 4.58e-136 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi94g00128 K11593 - gmx:100797755 1519.21