Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi94g00118 ATGAGGTGTGAGAAGGTAGGGTTGAAGAAAGGGGCATGGACTGCGGAAGAAGACGAGAAGCTTGTTTCTTATATTAAACAACATGGCCATGGAAACTGGTCTTCATTGCCCGCTAGAGCTGGTCTTGAAAGATGTGGAAAGAGTTGCAGATTGAGGTGGATCAATTATCTCAGACCTGACATAAAACGAGGAAACTTCACCTCCGAAGAAGACCGTACTATTGTTCAACTCCATGCCCTTCTCGGAAACAAATGGTCAATAATAGCAGGTCAGTTACCAAAAAGAACAGACAATGAGATAAAGAACTATTGGAATACTCACATCAAGAAAAGGCTTGTTAGAATGGGCATAGATCCCATTACCCACAAAAGATCTTCATCAAAATTAGGAGGCATGATGAACCTCCACATGGCTCAATGGGAGAATGCACGACTCCAAGCTGAAGCCAGACAATCCCTAATCATAAACAAAATCCCAACTACTAATTCTACTCCTCCTAAACCTTCATTAGGTGAAAGTAATAATAATATGATGATGGATGACTTTGTGTCAAAGTCAAAGTTGCAAGATGATGACATCATGGTGGTCGTGGAAGCATATATTTAG 606 0.4092 MRCEKVGLKKGAWTAEEDEKLVSYIKQHGHGNWSSLPARAGLERCGKSCRLRWINYLRPDIKRGNFTSEEDRTIVQLHALLGNKWSIIAGQLPKRTDNEIKNYWNTHIKKRLVRMGIDPITHKRSSSKLGGMMNLHMAQWENARLQAEARQSLIINKIPTTNSTPPKPSLGESNNNMMMDDFVSKSKLQDDDIMVVVEAYI 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi94g00118 201 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
Sebi94g00118 201 CDD SANT 65 108 IPR001005 -
Sebi94g00118 201 FunFam MYB-related transcription factor 9 62 - -
Sebi94g00118 201 CDD SANT 12 57 IPR001005 -
Sebi94g00118 201 Gene3D - 64 130 - -
Sebi94g00118 201 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 167 - -
Sebi94g00118 201 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Sebi94g00118 201 SUPERFAMILY Homeodomain-like 7 104 IPR009057 -
Sebi94g00118 201 SMART sant 9 59 IPR001005 -
Sebi94g00118 201 SMART sant 62 110 IPR001005 -
Sebi94g00118 201 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Sebi94g00118 201 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 57 IPR017930 -
Sebi94g00118 201 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Sebi94g00118 201 Pfam Myb-like DNA-binding domain 63 107 IPR001005 -
Sebi94g00118 201 Gene3D - 9 62 - -
Sebi94g00118 201 FunFam MYB transcription factor 64 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi94g00118 Sebi-Chr94 1853236 1854293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi94g00118 3 150 MYB Transcription Factor Family AT3G01140 69.872 2.06e-78 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi94g00118 Myb_DNA-binding 1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi94g00118 K09422 - gmx:100792464 250.751