Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi94g00099 ATGGTATATACAGACATGGGATCTCTCTCTCTCAGCTCCAACTATGGTGTTGTTTCAACTGTCTCTTCTTCTCAAGAGAGTAACTATGCCTGCAAGACCTCTGTGATGGAAAATAGTAGCAATACTGCAGGATGGACTTTTCCATTTATGAGGGAGTGCCTTTCCAAAAGCTTTGAAGAGCAACATCCCAACATGGATGATGTGGAGGGTTGTAATAATGGTAATTCTGATTGCAGTGATGGGATTGGGGAAAACAACCATAATGCTAACTCCAATGAAGAGAACCCTAATGAGAATCCTGTCAGTGGCAAAGAGGTAGATAGTGGACAATCCAAACTCTGTGCAAGAGGACATTGGAGACCTGCAGAAGATTCCAAGCTCAAGGAACTTGTGGCTCTTTATGGTCCTCAAAACTGGAACCTCATTGCTGAAAAGTTGGAAGGAAGATCAGGTAAGAGTTGTAGGTTGAGATGGTTCAACCAGTTGGACCCAAGGATCAACAGGAGAGCTTTCAGTGAAGAAGAGGAAGAAAGGCTAATGCAGGCACATAGAATTTATGGCAACAAATGGGCCATGATTGCTAGGCTTTTCCCTGGAAGAACAGATAATGCTGTCAAGAATCACTGGCATGTGATAATGGCCAGGAAGTACAGAGAACAATCCAGTGCTTACAGGAGGAGGAGACTGGGCCAATCTGTTTACAGAAGAATGGATCAAAATCCAAACTTTATGATCTGCAGAGAAACCCCAACAACAGAAACAGAACCACCATCACCCTATTTTCTCAATGCAGCACTCAGCAATAATAGTATGGCTATTTTACCATATGCTCCATCCTTCCATGGTGGTGGTGGGGTTGAGTATGGCTTAAATGTTTCAACCTACATGACTGGTGGGAGAGAAGCAATGTCAAGAAATGAGCAGCCCCCCCCACATGTTGGCTTGTATACTCAACAGGCACCATATGATTTCTTCTCTGGTGCAAGAAGCAATGACATGGTGGGAGAGTCTTTGAGTCAGATCAGATGCTGGGACAGGACTAGTGATGATCAATATCATCATCAAGTATCTGGTTTCTACCCTCCTCCTTATTATCCCCAACAATATATGCCAAACAATCACAATTTTTACAGTTACTCAAATTCCTCAGCCAGGGAACCATCATCCGTAGCAGCAGAAAACAGAAACAGAGATAAAGTTGTGATGATCAGTGACCCCTCAGATGCTGTTCCACCTCCATTTTTTGACTTCCTCGGAGTAGGAGCCAAATGA 1272 0.4355 MVYTDMGSLSLSSNYGVVSTVSSSQESNYACKTSVMENSSNTAGWTFPFMRECLSKSFEEQHPNMDDVEGCNNGNSDCSDGIGENNHNANSNEENPNENPVSGKEVDSGQSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLGQSVYRRMDQNPNFMICRETPTTETEPPSPYFLNAALSNNSMAILPYAPSFHGGGGVEYGLNVSTYMTGGREAMSRNEQPPPHVGLYTQQAPYDFFSGARSNDMVGESLSQIRCWDRTSDDQYHHQVSGFYPPPYYPQQYMPNNHNFYSYSNSSAREPSSVAAENRNRDKVVMISDPSDAVPPPFFDFLGVGAK 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi94g00099 423 ProSiteProfiles Myb-like domain profile. 163 213 IPR001005 -
Sebi94g00099 423 FunFam MYB transcription factor 169 239 - -
Sebi94g00099 423 CDD SANT 119 160 IPR001005 -
Sebi94g00099 423 MobiDBLite consensus disorder prediction 68 106 - -
Sebi94g00099 423 Pfam Myb-like DNA-binding domain 168 211 IPR001005 -
Sebi94g00099 423 Pfam Myb-like DNA-binding domain 116 162 IPR001005 -
Sebi94g00099 423 CDD SANT 170 210 IPR001005 -
Sebi94g00099 423 Gene3D - 169 236 - -
Sebi94g00099 423 FunFam MYB transcription factor 116 167 - -
Sebi94g00099 423 PANTHER MYB PROTEIN-RELATED 104 313 - -
Sebi94g00099 423 SMART sant 167 215 IPR001005 -
Sebi94g00099 423 SMART sant 115 164 IPR001005 -
Sebi94g00099 423 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 163 217 IPR017930 -
Sebi94g00099 423 MobiDBLite consensus disorder prediction 65 112 - -
Sebi94g00099 423 ProSiteProfiles Myb-like domain profile. 116 162 IPR001005 -
Sebi94g00099 423 Gene3D - 116 167 - -
Sebi94g00099 423 SUPERFAMILY Homeodomain-like 116 209 IPR009057 -
Sebi94g00099 423 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 116 162 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi94g00099 Sebi-Chr94 1659869 1661565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi94g00099 59 282 MYB Transcription Factor Family AT1G69560 54.911 1.69e-77 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi94g00099 Myb_DNA-binding 1.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi94g00099 K09422 - vvi:100253313 462.611