Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi94g00077 ATGGAAGAGAGAAATGATGCTGAGAAACTTGATGAAGTTATGCTACCAGGTTTCAGGTTTCATCCAACTGATGAGGAGCTTGTTGGGTTTTACCTCAAAAGAAAGATTCAGCAACGGCCTCTGTCTATTGAGCTCATCAAGCAGCTTGATATCTATAAATATGATCCTTGGGATCTTCCAAAGTTGGCCACTACAGGAGAGAAAGAGTGGTACTTTTACTGTCCCAGAGACAGAAAATATAGAAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGGTTCTGGAAAGCTACAGGGACTGATAGGCCTATCTACTCCTCAGAAGGTTCTAAGTGTATTGGCCTGAAGAAATCCCTAGTCTTTTACAAAGGTAGAGCTGCCAAAGGAGTCAAAACTGACTGGATGATGCATGAGTTTAGGCTACCTTCTCTCACAGACTCACTGTCACCAAAGAAGTGCATAGACAAGACCATTCCTGTTAATGAATCTTGGGCAATTTGCAGGATATTCAAGAAAACCAATTCTACAGCTCAAAGAGCTCTGTCTCACTCTTGGGTCTCTTCCCTACCTGAAACAAGAACATCTGATATGCTAACCAAAGATCAAGACATTACCCAGTTTTGTTCAGCAAACATGTCATTAACAAAGAAAACTAGCTTACCAAGCCAGTTCTGTAGTACTAACAACAATGACACCCAAAACTTAACCACTAATAGCAGTACTCTTTGTCCTTTAGATGTTGCCTCTTATAAATCCATTATTAACCCATTGCTACACAAAGCCTTTGATTATTTACCCATTTCAAATGGAGATCTTAATACAAGCTTGGTATTCTCATCTCCACTTGAAACATCCAATACTAATGCCAAATCTACAATGGATGTTTCTTCCATGTTGTTGAATATGTCATCCTCCATGCTTGGAGATTTTAGCAAGACTTGTTCTGAGGATACAACTACAAGCTTTAATGGTGGATTGCAAGAGCACTGTAATGACTACTACTCAATACCATTTCTACGTGAGATGCAAGCCACATTTGGGAACCAATATGATAATGCATTGGTAAAGGTTCCTAATGTGAATGTGCCTCGTGTTGATGACCAAGAGTTGGAGACAGTACCACGATCCATTGGGTTCCCATTGAGTAATATTGGCGATGCATGGAAGTCAAATCTGCTTTGGGATACTTCCTCTTGTCCTTGTGATGTTCCCTCTAGTTATAGTTATTCCACAACCAAGTGCTATACTTAG 1251 0.4037 MEERNDAEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLSIELIKQLDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLTDSLSPKKCIDKTIPVNESWAICRIFKKTNSTAQRALSHSWVSSLPETRTSDMLTKDQDITQFCSANMSLTKKTSLPSQFCSTNNNDTQNLTTNSSTLCPLDVASYKSIINPLLHKAFDYLPISNGDLNTSLVFSSPLETSNTNAKSTMDVSSMLLNMSSSMLGDFSKTCSEDTTTSFNGGLQEHCNDYYSIPFLREMQATFGNQYDNALVKVPNVNVPRVDDQELETVPRSIGFPLSNIGDAWKSNLLWDTSSCPCDVPSSYSYSTTKCYT 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi94g00077 416 FunFam NAC domain-containing protein 35 23 175 - -
Sebi94g00077 416 Gene3D NAC domain 23 177 IPR036093 GO:0003677|GO:0006355
Sebi94g00077 416 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 236 - -
Sebi94g00077 416 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Sebi94g00077 416 SUPERFAMILY NAC domain 13 172 IPR036093 GO:0003677|GO:0006355
Sebi94g00077 416 ProSiteProfiles NAC domain profile. 14 172 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi94g00077 Sebi-Chr94 1310616 1312162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi94g00077 1 345 NAC Transcription Factor Family AT1G26870 54.167 3.03e-112 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi94g00077 NAM 7.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi94g00077 - - gmx:100783995 648.277