Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi94g00057 ATGTGGATCCGAGGATTCAGTGTTTTGATCTTGGGTTGCATTTTGTTGTCCTTAATATCTGTGATTTCTGGTCTGGAACCCGAACTGGGATCGACCCGCGTTGTCTTTCAGACAAATTATGGGGATATTGAATTTGGTTTCTTTCCAACTGTTGCACCCAAAACTGTTGAGCACATTTTTAAACTTGTGCGACTTGGAGGCTATAACACTAATCATTTCTTTCGGGTGGATAAGGGATTTGTTGCCCAAGTAGCAGATGTTAAGGGTGGAAGATCTGCTCCCATGAATGAGGAACAAAGAAGAGAAGCTGAAAAGACTGTTGTTGGTGAATTTAGCGAAGTCAAACATGTACGGGGTATTCTTTCTATGGGAAGGTATGATGATCCAGACAGTGGTTCATCCTCGTTTTCAATACTACTTGGAAATGCTCCTCATCTTGATGGCAAGTATGCAATATTTGGAAGAGTTACTAAAGGCGATGATACATTAACAAAGCTTGAGCAACTACCTACCCGTAGAGAGGGTATATTTGTAATGCCAACAGAACGCATCACTATCCTCTCATCATATTACTATGACACGGAGACAGAAAATTGTGAGCAAGACAGATCTATTTTGAAGCGCAGGTTAGCTGCATCTGCTGTTGAAGTTGAAAGACAGAGAATGAAATGCTTCCCCTGA 681 0.4141 MWIRGFSVLILGCILLSLISVISGLEPELGSTRVVFQTNYGDIEFGFFPTVAPKTVEHIFKLVRLGGYNTNHFFRVDKGFVAQVADVKGGRSAPMNEEQRREAEKTVVGEFSEVKHVRGILSMGRYDDPDSGSSSFSILLGNAPHLDGKYAIFGRVTKGDDTLTKLEQLPTRREGIFVMPTERITILSSYYYDTETENCEQDRSILKRRLAASAVEVERQRMKCFP 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi94g00057 226 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 14 226 IPR044233 -
Sebi94g00057 226 CDD cyclophilin 35 188 - -
Sebi94g00057 226 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 188 IPR002130 GO:0000413|GO:0003755
Sebi94g00057 226 Gene3D - 24 199 IPR029000 -
Sebi94g00057 226 SUPERFAMILY Cyclophilin-like 33 194 IPR029000 -
Sebi94g00057 226 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 35 191 IPR002130 GO:0000413|GO:0003755
Sebi94g00057 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Sebi94g00057 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Sebi94g00057 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 IPR002130 GO:0000413|GO:0003755
Sebi94g00057 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 85 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi94g00057 Sebi-Chr94 873310 877632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi94g00057 34 189 U-box Gene Family AT5G67530 30.488 1.19e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi94g00057 - - gmx:100819238 403.675