Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi94g00050 ATGGGGAAAGGAAGAAGTCCTGGGAAATGGTTTAAGAACTTACTCTTGGGGAAGAAATCATCATCGAAGTCTAATTCATCAAAGAAGAATGATATTTTTAAACCTTCAAGTAACAAGGATGTGCTGGGGTTTTCTGAGGTATCCGTGCCTGATCCAACTGTGGATTCTTTGCTGATATCCCCACCAATATCTGGAACTAATGCTACTAAAGGAGCGCTTCCAGAAAAAGAAGTAGTTAGTAGGCCATCACAGGACAGGGATATTCTTCCAAATGGAGATAAAGAGGCTCATGCTCAAGCTATTACTAATTTTAGATCTCAAGAGGATCCTGAGAAACTCAGGCTTACAGAAGCAGCTATAAAAGTTCAGGCTGCTTCTAGAGGCTATCTGGCTCGTCGGGAATTTCAAACACTCAAAGGTGTCATACAACTGCAAGCTATTATCCGTGGCCACTTGGTTAGAAGACAAGCTGTTTCTGCTTTATACTGTGTGAAAGGAATTGTTAAATTTCAAGCATTGGCTCGTGGTTACAATGTTAGGCGTTCTGCTATTGGGCGTGAAGTCCTGAAAATTCGCAAGGATACTCAATGTTCAAATTCTATTGGGGTTGTTACATCCACACAGGCAGAGAAGCTGTCAGAAAATGTCTTTGTTCACAAGCTTTTGGCTTCCTCATCCTATTCACTTCCTTTATCCCTCAATGGTGAACTTGGGGAACCTAACTTGGCTTGGAAGTGGCTTGACCGCTGGACAAGGTCACACTTTTGGTCACCTCTTCCTAAATTGAAAAAGAAACATGATTCAGTGTCTGATGAAAAAGATAGGAGTTGTCAAACAGTTGAAAAGGGACAAGTTAAAAGAAATACCCGGAAATCTCCTGTTGTGAAAGCTGATGATGGCTCAATTCCAGGTTCTAACAAATATAAAAATCGTCCAAAAAAGGATTCAAACCACTCATTGCTTTCAGCTCAGGAACACCCACAAAAGGAAATAGAGAAAAGTAGTCTTAAAAAAACTCGCGTGCAGAATGTTCCAGACAGATCTGAGGTTGTTAATGAGAAAAGAAAACCCAGCACTAGGAAAATTTCAGATGATATTGTTACAGATGTTTCTGAGCAGGGCCCAAAGGCCTCTTCAGAGAAAATGAAAGATTCAACAGTGCCAAAGTCAAAAGAGGCTGATCCTGAGAAAGGTCTTGAACAGCAAGCAAAAGAAGAGAATGATAATAAGCCACATAATGATCCTATTGCTGTCTTGCAGACTAGTGTGGAAAATGGTGGAGATGAAAAAATTCAAGGACTTTGTGAAGACTTGAATGATGGTGACAAAATTATCAGCAACAATTGCCAAAGAAGAGCTTCACTACCTGCTAATTTTAATGATCAAGATAGTGAATTACATAACACTCCAAGACTGCCCAGTTATATGGCTCCTACTGAATCTGCAAAAGCTAAGCTAAGGGCACAAGGCTCGCCAAGATTAGCTACTGATTTGGTAGACAAAAACAGTATAACCAGGCGGCATTCACTTTCATCTTCGCTTAATGGCAGGTCAGGTTCATTTTCCCCAAGAGCAGAAAGATTGATAGCCATGAGTGGCAGAGGAGTGCTAAAGACTGATAGATCTCTGTCATCTTCAAGGGATGGGACTGACACCAAATTAGCTCAATCTGAGGACAAAGATACTCCAAGGAGGTGTGGTGGATGGAGATGGGGGCGCACAGAGGAAGGCATCAATTGGCAACATGCACAAAGGAAGAGGCGTCATCACGTGGAGGAAGGGCAGTTTAAGGAGGAAGACAGCGTGTAG 1809 0.4179 MGKGRSPGKWFKNLLLGKKSSSKSNSSKKNDIFKPSSNKDVLGFSEVSVPDPTVDSLLISPPISGTNATKGALPEKEVVSRPSQDRDILPNGDKEAHAQAITNFRSQEDPEKLRLTEAAIKVQAASRGYLARREFQTLKGVIQLQAIIRGHLVRRQAVSALYCVKGIVKFQALARGYNVRRSAIGREVLKIRKDTQCSNSIGVVTSTQAEKLSENVFVHKLLASSSYSLPLSLNGELGEPNLAWKWLDRWTRSHFWSPLPKLKKKHDSVSDEKDRSCQTVEKGQVKRNTRKSPVVKADDGSIPGSNKYKNRPKKDSNHSLLSAQEHPQKEIEKSSLKKTRVQNVPDRSEVVNEKRKPSTRKISDDIVTDVSEQGPKASSEKMKDSTVPKSKEADPEKGLEQQAKEENDNKPHNDPIAVLQTSVENGGDEKIQGLCEDLNDGDKIISNNCQRRASLPANFNDQDSELHNTPRLPSYMAPTESAKAKLRAQGSPRLATDLVDKNSITRRHSLSSSLNGRSGSFSPRAERLIAMSGRGVLKTDRSLSSSRDGTDTKLAQSEDKDTPRRCGGWRWGRTEEGINWQHAQRKRRHHVEEGQFKEEDSV 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi94g00050 602 MobiDBLite consensus disorder prediction 579 602 - -
Sebi94g00050 602 MobiDBLite consensus disorder prediction 308 367 - -
Sebi94g00050 602 MobiDBLite consensus disorder prediction 261 294 - -
Sebi94g00050 602 PANTHER IQ-DOMAIN 5-RELATED 1 517 - -
Sebi94g00050 602 MobiDBLite consensus disorder prediction 506 602 - -
Sebi94g00050 602 MobiDBLite consensus disorder prediction 376 412 - -
Sebi94g00050 602 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 182 IPR027417 -
Sebi94g00050 602 MobiDBLite consensus disorder prediction 1 39 - -
Sebi94g00050 602 MobiDBLite consensus disorder prediction 60 92 - -
Sebi94g00050 602 MobiDBLite consensus disorder prediction 544 571 - -
Sebi94g00050 602 Gene3D - 111 162 - -
Sebi94g00050 602 MobiDBLite consensus disorder prediction 261 425 - -
Sebi94g00050 602 Pfam Protein of unknown function (DUF4005) 462 537 IPR025064 -
Sebi94g00050 602 SMART iq_5 137 158 IPR000048 GO:0005515
Sebi94g00050 602 SMART iq_5 162 184 IPR000048 GO:0005515
Sebi94g00050 602 SMART iq_5 114 136 IPR000048 GO:0005515
Sebi94g00050 602 MobiDBLite consensus disorder prediction 456 475 - -
Sebi94g00050 602 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Sebi94g00050 602 MobiDBLite consensus disorder prediction 506 520 - -
Sebi94g00050 602 ProSiteProfiles IQ motif profile. 165 190 IPR000048 GO:0005515
Sebi94g00050 602 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Sebi94g00050 602 MobiDBLite consensus disorder prediction 17 32 - -
Sebi94g00050 602 Pfam IQ calmodulin-binding motif 139 156 IPR000048 GO:0005515
Sebi94g00050 602 Pfam IQ calmodulin-binding motif 116 136 IPR000048 GO:0005515
Sebi94g00050 602 Pfam IQ calmodulin-binding motif 165 182 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi94g00050 Sebi-Chr94 679826 693586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi94g00050 4 550 IQD Protein Family AT1G14380 32.667 4.84e-71 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi94g00050 - - aprc:113869184 776.548