Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi94g00049 ATGAACTCCCCATCTTTTCATAGAACCAAGCCAGTTTCTTGGAATTCAGCTGAGACTCTTTCAGAAAGATTCTCCATTGATTCTTTCTTTACTGTCTTGACAAAGCTTTCAAATATGAAGGTGTTGTCATTGGTGTCCCTTGGTTTGTGGGGTCCTTTACCATCCAAGATTAGTCGGTTCTGGTCACTTGAAGTGCTTAACATTACCTCAAATTTCATTTATGGAGAAATCCCATCATCGATCTCCTCTTTGAAAAATCTCAGGAGTCTAGTTTTGGTTGATAATCTGTTCAATGGGAGTGTCCCTAATCTAAGAAGGCTAGCATCTCTTGAAGAGCTCAATTTGGCTGGTAACAGATTTGGTCCTGAATTCCCTTCAGTGGACAAGAATCTTGTGAAGATTATCTTAAGAAACAATTCTCTAAGATGTCAAATTCCTTCCCAACTCATGCATGTTGATAAACTTCAGCTATTTGACATCTCTTCCAATGCAATATTTGGAAACATCCCATCATTTCTGTTTTCTCTTCCTTTCCTCCAGCACCTAAACTTGGCTGCAAATCAACTAAGTGGTTCCCTTCCTGTGAATATATCTTGTAGTCCTGCTCTAACATTTGTTGATATCTCACACAACCTCCTGATAGGAAAATTACCATCTTGCATTGGTTCAAAGTCCTCAAATCGAACAATATTGTATTCTGGGAATTGTTTGTCAACCAGAAGCTTACATGATCAACATCCATCTTCATATTGCAAGAAAGTGGAGGCCTTAGCGGTTAACCCACAACTTAAAAGACAGAAGAAGGAAATGAAGATACTACTGCGCCTAGTACTTGGTATCACTGGAGGTGTTGTGGGAATTGCAGGACTTCTGGTTCTACTTATTTCTTGCATCTTGAGGAAGTCCAAAGCAGAAAGAGCTGATAGTAACATAGACAGATGTGTTGATTATATTGATGATAAAGTTTCTGTCCGTGCATATCCAAAACCAAATAATAATGCAAGACATGTTCCTCAGTTAATGAGGTTTGCTACACTTGGATTACCACCATACAGCATTTTCACATTAGAAGAAATTGAAGATGCAACTAACAACTTTGACCAATCAAATCTAATAGGAGAAGGATCACAAGGACAGCTATATAAAGGTTGCCTCAGAGATGGTTCAGTGGTCATGGTTAATCTTGTAAAATTAAAGGACAAGAGTTTGGCCAAAAACAGTATTCAGAACTTGAAAGTATTACCTTATTTACGGCACAGGCATTTAGTGAGTGTTCTAGGACACTCTGTCATCACTTATCAGGACCGTCCCCAAACAAGAAGCATAATATTCATTGTATTTGAACACATCACAAACGTGTCATTGAGGGATCATCTTACAGATAGGAGAAAAAAGGAAATGCTGAAGTGGCCACAAAGAATGGCAATCAGCACAGGCATTGCAAGAGGAATCCAGTTCTTACACACAGGAGTTAATCCGGGCATATTTGGCAACAATATAAAGATTGAGAACATTCTGTTGGATAATAGTCTCAATGCAAAAATTACTGGATACAGCATTCCATTGCCATCCAAGAAAGGTCTTGACAGAAAACTTAATGAACAAAGTGTCCCCAATCATATTGGCAGCATCAATATTGCAGAAAAGGAAGACATCTATCAGTTGGGTGTTATTCTACTTGAAGTTATCACTGGCAAACTAATTACATCTTCTAATGATGTAGAGGAGCTGAAGTATGAGCTGGAGAGAGGTTTATCAGAAGCTGCATCACCAATATTAATAGGCACAATCGATCCTTCCCTCCAGGGAACTTACACATATGAATCACTGAAGATTGCAGTTCAGATCACCATCAATTGTCTCAGCAAGGTTTCTAGTAATCGCCCTTCAATAGAGGATGTTCTCTGGAATTTGCAGTACTCCATGCAAGTTCAAGAGGCGAGGACCAGCAGTGGAAACCTCAATTTAAGATTCTAA 1977 0.389 MNSPSFHRTKPVSWNSAETLSERFSIDSFFTVLTKLSNMKVLSLVSLGLWGPLPSKISRFWSLEVLNITSNFIYGEIPSSISSLKNLRSLVLVDNLFNGSVPNLRRLASLEELNLAGNRFGPEFPSVDKNLVKIILRNNSLRCQIPSQLMHVDKLQLFDISSNAIFGNIPSFLFSLPFLQHLNLAANQLSGSLPVNISCSPALTFVDISHNLLIGKLPSCIGSKSSNRTILYSGNCLSTRSLHDQHPSSYCKKVEALAVNPQLKRQKKEMKILLRLVLGITGGVVGIAGLLVLLISCILRKSKAERADSNIDRCVDYIDDKVSVRAYPKPNNNARHVPQLMRFATLGLPPYSIFTLEEIEDATNNFDQSNLIGEGSQGQLYKGCLRDGSVVMVNLVKLKDKSLAKNSIQNLKVLPYLRHRHLVSVLGHSVITYQDRPQTRSIIFIVFEHITNVSLRDHLTDRRKKEMLKWPQRMAISTGIARGIQFLHTGVNPGIFGNNIKIENILLDNSLNAKITGYSIPLPSKKGLDRKLNEQSVPNHIGSINIAEKEDIYQLGVILLEVITGKLITSSNDVEELKYELERGLSEAASPILIGTIDPSLQGTYTYESLKIAVQITINCLSKVSSNRPSIEDVLWNLQYSMQVQEARTSSGNLNLRF 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi94g00049 658 SUPERFAMILY Protein kinase-like (PK-like) 347 638 IPR011009 -
Sebi94g00049 658 Gene3D Phosphorylase Kinase; domain 1 333 435 - -
Sebi94g00049 658 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 653 - -
Sebi94g00049 658 Pfam Protein kinase domain 367 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi94g00049 658 Gene3D Ribonuclease Inhibitor 7 127 IPR032675 -
Sebi94g00049 658 Gene3D Transferase(Phosphotransferase) domain 1 450 654 - -
Sebi94g00049 658 SUPERFAMILY L domain-like 28 242 - -
Sebi94g00049 658 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 339 439 - -
Sebi94g00049 658 ProSiteProfiles Protein kinase domain profile. 366 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi94g00049 658 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 130 639 - -
Sebi94g00049 658 Gene3D Ribonuclease Inhibitor 128 274 IPR032675 -
Sebi94g00049 658 FunFam Putative LRR receptor-like serine/threonine-protein kinase 128 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi94g00049 Sebi-Chr94 667245 669920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi94g00049 12 581 Miscellaneous Gene Families AT2G02780 49.241 2.34e-160 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Sebi94g00049 Pkinase 1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi94g00049 - - gmx:100800018 905.59