Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi94g00045 ATGGCAGTATTAAGGGACAATGGACAGCAATGTGAACAACCAAAAGAGCAGCAGCTACAGGGTGACCAATCAACCACTACCACCACGGGGCTTACAATAATGAAGAAGTTGCTCCAAGAGCTTATGATTTGGTTGCGGTCAAGTACTGGGGAACATCAACTTTCACAAAATTTCCCTGTATCTGATTATGAGAAAGAAATTAAGATTATGATAACTGTAACAAAAGAAGAATATCTTGCTTCATTAAGAAGGAGAAGCAGTGGTTTTTCCAGAGGTGTATCAAAGTATAGAGGAGTGGCAAGGCCCCATCACAACGGAAAATGGAAGGCAAGGATAGGAAGAGTGTTTGGCAACAAGTACCTCTACCTTGGGACATACAGTACACAAGAAGAGGCAGCTCGGGCATATGATATTGCAGCAATTGAACACAGAGGGATAAATGCAGTGACAAACTCTGACCTAAGGACTTATATCAGAAGCCTAAGACCAAGTGCTCATTCTACTGCTTCTCAAAATCAAAAGCCAAGTATAGATAACCAGCCCTTTACAACACCTAACCTTATCCAAACTAGAGAAACCACTAAGGTGTCCAATTTCAACTTCCATCCATTCCCTGGAGGTGAATTGGACAACAACAAAAAGCAAGAAATTTCCCAGTATATGACCCCTTTAAGTCGTGGCAATAAATCAGCTTCCTCAACAGCATTAGGACTTCTCCTAAAATCCTCAGTATTCAGAGAACTGGTGCAGAGAAATCTGAATTTTGTAAATGAAGAAACTGAAATGAAAAACACACAAGAAGGCACTGATGATGGAGTACGAGTACCTCTTACATATGCTATTCCAATAGCAACAGCTTACCTAACTTGGAGTCGCCAGAAGAGAGCACATTGCCACTGTATCACAGTTCCCTGCAATTCCCCCATGGAACGGTACTTTAAAAGTTTCTGA 951 0.4132 MAVLRDNGQQCEQPKEQQLQGDQSTTTTTGLTIMKKLLQELMIWLRSSTGEHQLSQNFPVSDYEKEIKIMITVTKEEYLASLRRRSSGFSRGVSKYRGVARPHHNGKWKARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEHRGINAVTNSDLRTYIRSLRPSAHSTASQNQKPSIDNQPFTTPNLIQTRETTKVSNFNFHPFPGGELDNNKKQEISQYMTPLSRGNKSASSTALGLLLKSSVFRELVQRNLNFVNEETEMKNTQEGTDDGVRVPLTYAIPIATAYLTWSRQKRAHCHCITVPCNSPMERYFKSF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi94g00045 316 Gene3D AP2/ERF domain 94 154 IPR036955 GO:0003700|GO:0006355
Sebi94g00045 316 MobiDBLite consensus disorder prediction 1 26 - -
Sebi94g00045 316 SUPERFAMILY DNA-binding domain 94 151 IPR016177 GO:0003677
Sebi94g00045 316 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 56 218 - -
Sebi94g00045 316 CDD AP2 94 151 IPR001471 GO:0003700|GO:0006355
Sebi94g00045 316 ProSiteProfiles AP2/ERF domain profile. 95 153 IPR001471 GO:0003700|GO:0006355
Sebi94g00045 316 MobiDBLite consensus disorder prediction 163 184 - -
Sebi94g00045 316 MobiDBLite consensus disorder prediction 10 26 - -
Sebi94g00045 316 SMART rav1_2 95 159 IPR001471 GO:0003700|GO:0006355
Sebi94g00045 316 Pfam AP2 domain 94 143 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi94g00045 Sebi-Chr94 623281 624747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi94g00045 57 193 AP2-EREBP Transcription Factor Family AT3G54320 62.774 8.66e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi94g00045 AP2 5.5e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi94g00045 - - gmx:100798483 311.997