Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi94g00036 ATGGGTATTTCCAGAGATTCCATGCACAAAAGGCGTGCCACTGGTGGCAAGAAGAAGGCATGGAGAAAGAAGAGAAAGTATGAGCTTGGTCGCCAGCCAGCAAACACCAAGTTATCAAGCAACAAGACAGTTAGGAGGATTCGTGTTAGGGGTGGCAATGTGAAATGGAGGGCATTGAGGTTGGATACTGGAAATTACTCATGGGGTAGTGAAGCTGTAACTCGCAAGACTCGTATTCTAGATGTGGTTTACAATGCCTCAAACAATGAGCTTGTGCGAACTCAAACTCTGGTCAAGAGTGCTATTGTCCAGGTTGATGCCGCTCCATTCAAACAGTGGTACCTTCATCACTATGGTGTTGATATTGGTAGAAAAAAGAAAGCAGCATCCAAGAAGGACTCTACAGAGGAGGGTGGTGAAGCTGCTGCTGAAGAAACTAAGAAAAGTAATCATGTTCAGAGAAAACTTGAGAAGCGCCAGAAAGATCGTAAGCTTGATCTTCACATTGAAGAGCAGTTTGGTGGTGGTCGATTGCTGGCCTGTATTTCTTCTCGCCCTGGTCAATGTGGTCGGGCTGATGGGTATGCTTAA 591 0.4569 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLHHYGVDIGRKKKAASKKDSTEEGGEAAAEETKKSNHVQRKLEKRQKDRKLDLHIEEQFGGGRLLACISSRPGQCGRADGYA 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi94g00036 196 Gene3D - 32 161 - -
Sebi94g00036 196 Gene3D - 162 196 - -
Sebi94g00036 196 MobiDBLite consensus disorder prediction 125 163 - -
Sebi94g00036 196 Pfam Ribosomal protein S8e 5 195 IPR022309 -
Sebi94g00036 196 NCBIfam ribosomal protein eS8 1 195 IPR001047 GO:0003735|GO:0005840|GO:0006412
Sebi94g00036 196 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Sebi94g00036 196 MobiDBLite consensus disorder prediction 1 38 - -
Sebi94g00036 196 CDD Ribosomal_S8e_like 5 195 - -
Sebi94g00036 196 MobiDBLite consensus disorder prediction 11 26 - -
Sebi94g00036 196 PANTHER 40S RIBOSOMAL PROTEIN S8 1 195 IPR001047 GO:0003735|GO:0005840|GO:0006412
Sebi94g00036 196 FunFam 40S ribosomal protein S8 32 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi94g00036 Sebi-Chr94 453935 455971 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi94g00036 1 195 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.184 4.07e-117 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi94g00036 K02995 - gmx:100500112 361.303