Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi94g00020 ATGCTTTTGCAGTTTGATTTGGTTTACGCTTCGTTCGTTGGATATTCCAATTTCAATGGTAAAAGGTCTTCAATGGAGGATTTCTTTGAGACCAGAATATCAGAGGTTGATGGGGAATCTCCCTTGGAGTATGCGCAGGAGATGTTTGAAGAAATGACAAAGAATAATGTTGTTGTTACTGTCCCTGCCTACTTTAATGATTCACAGTGTCAAGCTACCAAGGATGCTGGTGTTATTGCAGGGCTTAATGTCATGAGAATTATCAATGAGCCCACTGCTGCTGCCATTGCTTATGGTCTTGACAATAAGTCAACCAGCGTCTGTGAGAAGAATGTCTTGATCCTTGATCTTATTGGTGGTTCCACTAGAATTCCAAAGGTTCAACAACTATTGCAGGCTTTCTTTACTGGAAAGGAGCTACCTCTTATTACTGCAAACACTATTTTGTTTATACTTGTTGTTAATTACCCTGTCAACAAGGTTTCCTGCTATGTACTTTGGTGGTTGGGATGA 513 0.4016 MLLQFDLVYASFVGYSNFNGKRSSMEDFFETRISEVDGESPLEYAQEMFEEMTKNNVVVTVPAYFNDSQCQATKDAGVIAGLNVMRIINEPTAAAIAYGLDNKSTSVCEKNVLILDLIGGSTRIPKVQQLLQAFFTGKELPLITANTILFILVVNYPVNKVSCYVLWWLG 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi94g00020 170 SUPERFAMILY Actin-like ATPase domain 50 101 IPR043129 -
Sebi94g00020 170 PANTHER HEAT SHOCK PROTEIN 70KDA 117 140 IPR013126 GO:0005524|GO:0140662
Sebi94g00020 170 Pfam Cellulose synthase 137 165 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sebi94g00020 170 ProSitePatterns Heat shock hsp70 proteins family signature 3. 115 129 IPR018181 -
Sebi94g00020 170 Gene3D - 30 122 - -
Sebi94g00020 170 FunFam Endoplasmic reticulum chaperone BiP 42 114 - -
Sebi94g00020 170 Pfam Hsp70 protein 54 117 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi94g00020 Sebi-Chr94 287460 288084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi94g00020 82 140 Calmodulin-binding Proteins AT5G02500 47.458 1.05e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi94g00020 K03283 - pvy:116134426 115.546