Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi947g00012 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGACATTGCTGAAAAGAAGATGGAAAGCAGGGATTTCATGGGGGCTCGTAAATTTGCTCTTAAAGCTCAGCAGCTGTATCCTGATCTGGAAAATATAGCTCAAATGCTTGTTGTTTGTGATGTGCATTGCTCTGCTGAGATGAAATTGTTCGGCAATGAGATGGACTGGCCCTTCATTGCATATAATGTGGATAGGAAAAGTACACCATCAGCAACTAATTCAAGTCAGCAAGCTTTTGGCCAGCAAAAAGATGGTCTGAATCATGGTCCTTCCAAGATGGGTGGATCTCAAGGCAACTTGCATGCTGAGAAGTCCAATACTGGGCTTCACGAGAAGAAAGGCCCTGTTGATGTCTCTGGAAAGCCACATGGAAAGAGGAAGAGGAATAAGTTGGCAGAATCTAGTCAAAGTTCTGATTTTACGAGCAGCACTGATTCTGAAGGTGGTAGGGTTGTTGGTGAGGATGGTGTTCCTGGTGTAGAAAATCATTCAACTTACAGAGAAGAGCAACCACGCAGATCTGCACGACAAAAGCATAAGGTTTCCTACAAGGATAATGTGAGTGACAATGATGATGACCTCTTAAGACCTTCAAAAAGGGGTAAGGAGTGTGGATCACCATGTGGTGATGGTGAAAGTCAGGGTGAGAGAATTAGAAAGAATGATCAGAATGGTTTAGCTGCTGAAGAGAGCTTACGAGATAGAAATGAGGAAACTAAAGTGGCGAGGGGAAAAGCAGTGGGAGGGTCAAAGCAGATGGATGAAACATCAGAGCATTCTTTTTCGGATTTAGCCTCCAAAGCAACAAATCATCCAAATGCTTATGTCTATTTCGAAGCAGAGTTCAGTGACTTTGACAAGGACAAGAAAAAAGAATGTTTTGTGGCAGGGCAGATTTGGGCTGTTTATGATACAACACATGGCATGCCTAGATTTTATGCTTTAATCAGGAAAGTTCTATCTCCTAGATTCAAGCTGCAGATAACATGGTTGGAATCACATCCAGGTAACAATGATGAAATGAAGTGGGTAAATGAGGATATGCCTGTTGCATGTGGGAAATATAAACTTGGTGACACTAACATCATGGAAGATCATCTGATATTCTCTCATGTGGTTACGTGTGAAAAGATTGGCCGCAATACTTTCAAAGTGTATCCTAGAAAGGGAGAAACTTGGGCTCTTTTAAAAATTGGGATATCAAATGGTACATGGATGCAGAATCTCATAAGCAGTATGAATATGAGTTTGTTGAAGTCTTGTCAGATTATGTTGAAGGAAGTAGTAGATGTTCCTGTAGGATCTTATGAACTTGATCCTGCAGCTTTGCCGATGAATCTTGAAGAGTCTGCTGTTCCTGAAAATTTGGATGTGAAGTTTGGTCACAGTTCTGGCACTGAGAATACAAGATCTTCAGAAAGATCAAAACCCCCAATGACATCTGACAGAGAGGTATCTACTCCCAAGGTTAATTTGAAAAGAAGCAATTTGGCTGAGAATAAGGATTTTGTTGATGATATTGATGATTGTCATGCTCCTCCAGCTTCGACCCCAGAAGCTATTGTAGTTCCAGATACCCAATTCTTCAATTTTGATGCTGAGAGGTCCCTTGAAAAGTTTCAAATTGGTCAGATTTGGGCATTTTACAGTGATGAGGATGGATTGCCAAAATACTATGGTCAGATTGATGGGATTGAGACTAGCCCACATCTTGAATTGCATGTTTCTTGGCTTGCTTGCTGCTGGCTACCAGAGAATACCACTAGATGGGAAGACAAAGATATGGCTATTTCCTGTGGCAGATTTAAAGTTAATAAAAGAATTGACTTTCTCAGTGTTTATAGTGGCACCGATTCTGTTTCACACCAAGTGCATGCTGATGCTGTTGGCAACAAAAAGAATTACGCCATCTTTCCAAGGAAAGGTGAAGTTTGGGCATTATATAGAAAGTGGTCAAATAAAATCAAATGTTCTGACTTGAAAAATTGGGAGTATGACATAGTTGAAGTTCTTGAAGAAACTGATTTATTTACAAATGTTCTAGTATTGGAGTTTGCTAGTGGTTTTAGTTCCATTTTCCGGGGCAAGTCAAATGAAGGATCATCTGTCAACCTGAGAATACCCAGAAAAGAGTTGCTTAGGTTCTCCCACAGAATTCCAGCTTTCAAACTGACAGAAGAGCATGGCAATCTGAGTGGCTTCCTGGAACTTGATCCAGGTGCGCTACCAATTCATTATTATGGCTTGGGATGA 2289 0.4093 MDCNKEEALRAKDIAEKKMESRDFMGARKFALKAQQLYPDLENIAQMLVVCDVHCSAEMKLFGNEMDWPFIAYNVDRKSTPSATNSSQQAFGQQKDGLNHGPSKMGGSQGNLHAEKSNTGLHEKKGPVDVSGKPHGKRKRNKLAESSQSSDFTSSTDSEGGRVVGEDGVPGVENHSTYREEQPRRSARQKHKVSYKDNVSDNDDDLLRPSKRGKECGSPCGDGESQGERIRKNDQNGLAAEESLRDRNEETKVARGKAVGGSKQMDETSEHSFSDLASKATNHPNAYVYFEAEFSDFDKDKKKECFVAGQIWAVYDTTHGMPRFYALIRKVLSPRFKLQITWLESHPGNNDEMKWVNEDMPVACGKYKLGDTNIMEDHLIFSHVVTCEKIGRNTFKVYPRKGETWALLKIGISNGTWMQNLISSMNMSLLKSCQIMLKEVVDVPVGSYELDPAALPMNLEESAVPENLDVKFGHSSGTENTRSSERSKPPMTSDREVSTPKVNLKRSNLAENKDFVDDIDDCHAPPASTPEAIVVPDTQFFNFDAERSLEKFQIGQIWAFYSDEDGLPKYYGQIDGIETSPHLELHVSWLACCWLPENTTRWEDKDMAISCGRFKVNKRIDFLSVYSGTDSVSHQVHADAVGNKKNYAIFPRKGEVWALYRKWSNKIKCSDLKNWEYDIVEVLEETDLFTNVLVLEFASGFSSIFRGKSNEGSSVNLRIPRKELLRFSHRIPAFKLTEEHGNLSGFLELDPGALPIHYYGLG 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi947g00012 762 MobiDBLite consensus disorder prediction 146 160 - -
Sebi947g00012 762 MobiDBLite consensus disorder prediction 117 134 - -
Sebi947g00012 762 MobiDBLite consensus disorder prediction 173 218 - -
Sebi947g00012 762 Pfam Domain of unknown function (DUF3444) 531 739 IPR024593 -
Sebi947g00012 762 Pfam Domain of unknown function (DUF3444) 287 409 IPR024593 -
Sebi947g00012 762 MobiDBLite consensus disorder prediction 79 274 - -
Sebi947g00012 762 MobiDBLite consensus disorder prediction 473 503 - -
Sebi947g00012 762 MobiDBLite consensus disorder prediction 225 256 - -
Sebi947g00012 762 MobiDBLite consensus disorder prediction 469 503 - -
Sebi947g00012 762 MobiDBLite consensus disorder prediction 79 96 - -
Sebi947g00012 762 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi947g00012 Sebi-Chr947 168103 170999 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi947g00012 4 68 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 43.939 1.08e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi947g00012 - - gmx:100795200 854.358