Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi943g00013 ATGCTTCAATTTTCACAAGAGTCGAACCAAACCGTCGGAAGGTTGTCGATGGCGGACTCGGACAATGACTCCGGCGGGGCGCATAACACCGGCAGAAACACTCAGTGCAGTGAGATGTCACCAGGGGAACAAGACTGGTTCCTGCCAATAGCAAATATGAGTAGCATCATGAAGGTGTTCCCGGCAAGCACAAAGATCTCAAAGAACGTGAAGAAAACGATGCAGGAGTGTGTGTTGGAGTTCATCAGTTTCATCACCGTCAATTTTGACCAACCATGA 279 0.4875 MLQFSQESNQTVGRLSMADSDNDSGGAHNTGRNTQCSEMSPGEQDWFLPIANMSSIMKVFPASTKISKNVKKTMQECVLEFISFITVNFDQP 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi943g00013 92 SUPERFAMILY Histone-fold 17 86 IPR009072 GO:0046982
Sebi943g00013 92 MobiDBLite consensus disorder prediction 1 42 - -
Sebi943g00013 92 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 47 86 IPR003958 -
Sebi943g00013 92 MobiDBLite consensus disorder prediction 1 41 - -
Sebi943g00013 92 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 20 87 IPR027113 GO:0001228|GO:0006355|GO:0016602
Sebi943g00013 92 Gene3D Histone, subunit A 34 88 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi943g00013 Sebi-Chr943 190153 190431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi943g00013 17 86 CCAAT-HAP3 Transcription Factor Family AT4G14540 64.789 1.10e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi943g00013 K08065 - qsa:O6P43_013552 97.4413