Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi941g00008 ATGGACGACGAAAACAGAGACAATCGAGCTTACGACGTTCTAGTTGCTGAGCTCCATTCGTTCCTGGAATTCGCTAACAGCTGGGCTGGTTTGAGGGACAAAAAGCATTTGATTAGATTAGATCGGAAAAAGGAACATAGACCTCTTACTCGAACAAATTGTCAAGCTAAGTTGAGGGTTCGCTTTGATTATAAGACTGGGAAATTTAAGGTTGTTTCCTTTTTAGACTCTCATAACCATGATTTGACCCCTGCTAAATTTGTTCCTTTAATGCCTGCATATCGTTGTTTGAGTGATGGCGACAAAGCCCAAGTTGATGCATTGCATTCTCATGGTGTTAGACCTTGTCAAATAATGGGTTTTCTTGTTGATAAAAAAGGAGGTTATAGAAACGTCGGTTTTTCAAAGAAAGATTTATACAACTACATAGATGAGGTTAGGAGGGAGCCTGATATGATGAGGGTGTGTCGTTTTGTGCTTGCTAGTTCCCACTGTAACATTATTTGTGATATGGTTTCACAAAAACGTGAGCATTTTAAGCAGTTCATTGGTGACATTATGAAGCTGAAACAGAAGTATGAGAATCTGTGTTCCGTTAGTAGCACAAGTACTGTTGAGATAAATGTTGTGCATGATCCAACTGTGGTGAAGACCAAAGGTGCTCCTACGAAGGCTAGGAAGAGGCGTAAGAGAAAGAGGTGTTCGAACTGTCAAACCAGTGGACATGTCATCACAACTTGTCCTAGGCTGGTTCCACCAGAAGATGAAGTGAACGTTAATCCTGAAGTTTCAGTAGCTGAGTCTGAGAGTCTAATGAGGGACGCAGACAATAGTGAGGAAGGAGCTGCATTTGATGACAATGTCAGAGACACAAGCTCCAATCACATGTCAAGAACAATTAGTGACAGTTTGGACAATGCATCAAGTAGTGCTAATAGTCACTTGAAGAAAAAGAAGATGAAGTCCCTTTCCCAGCTTTCAGACTCTGTCTGTGTCAGTACAGAAGATAGGCATAATCGATCTCATTCCAGAGCAAAACAAGGAAGACAATGTCCCAAAAAAAGTGGTGCAGACTTAGAAGGTCCTTCATCCAAACCAGAAAAAGTAGTTCACCAACATGGTTCTGTCATTCCCACACCTGAGAATGCTACCACAATTCCTATTGGGTTTCCAACCAATATGTTTGCACCAACTTTAAACAATGATTTACCAAATTCATCTCTGGGTAATGTCATGTTACCAAATGAAGGGAGTTGTCTGGCTCATGGGTTATTTCCCTTATTCCCAACTCAACCCCATGTTCATATCAATACCCAACAGTCCACTAATGAAGTTGCGAATGATGCTGATAAAAGGACTTCTGTATCGAATGATCTACTCCGTAATGTCATTACAAATATTGGTGGGTTAGGTGACAAGAAGGAAAAGAAGAAATTATGA 1440 0.4062 MDDENRDNRAYDVLVAELHSFLEFANSWAGLRDKKHLIRLDRKKEHRPLTRTNCQAKLRVRFDYKTGKFKVVSFLDSHNHDLTPAKFVPLMPAYRCLSDGDKAQVDALHSHGVRPCQIMGFLVDKKGGYRNVGFSKKDLYNYIDEVRREPDMMRVCRFVLASSHCNIICDMVSQKREHFKQFIGDIMKLKQKYENLCSVSSTSTVEINVVHDPTVVKTKGAPTKARKRRKRKRCSNCQTSGHVITTCPRLVPPEDEVNVNPEVSVAESESLMRDADNSEEGAAFDDNVRDTSSNHMSRTISDSLDNASSSANSHLKKKKMKSLSQLSDSVCVSTEDRHNRSHSRAKQGRQCPKKSGADLEGPSSKPEKVVHQHGSVIPTPENATTIPIGFPTNMFAPTLNNDLPNSSLGNVMLPNEGSCLAHGLFPLFPTQPHVHINTQQSTNEVANDADKRTSVSNDLLRNVITNIGGLGDKKEKKKL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi941g00008 479 Pfam FAR1 DNA-binding domain 30 83 IPR004330 -
Sebi941g00008 479 PANTHER OS01G0519700 PROTEIN 23 149 - -
Sebi941g00008 479 MobiDBLite consensus disorder prediction 287 313 - -
Sebi941g00008 479 MobiDBLite consensus disorder prediction 272 286 - -
Sebi941g00008 479 MobiDBLite consensus disorder prediction 266 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi941g00008 Sebi-Chr941 114677 118831 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi941g00008 FAR1 1.7e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi941g00008 - - ccaj:109794460 159.458