Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi93g00125 ATGCACTTGAAATGTTTCTGTTGTTTTCTCTCTGAAGAAGAGCAATCCCAAAAACGGACTGTAGAGAAGAAAAATAGGGACTATCCATGGGAAATATACACGTTGAAGGAGTTGCTTCGCGCAACAAACAACTTTCATCAAGATAACAAGATTGGAGAAGGTGGATTTGGAAGTGTTTATTGGGGTCGAACAAGTAAAGGCGTCGAGATCGCTGTGAAGCGGTTGAAGACGATGACTGCAAAGGCAGAGATGGAGTTTGCAGTTGAGGTTGAAGTACTTGGAAGGGTGAGACATAAGAATTTATTGGGCTTGAGAGGGTTCTATGCAGGTGGAGAAGAAAGGTTGATTGTCTATGATTACATGCCTAATCACAGCTTGCTCACTCATTTGCATGGTCAACTTGCTACCGATTGTCTATTAGATTGGCCTAAAAGAATGTGCATAGCAATTGGGGCAGCTGAAGGCTTAGCGGATATTGTTCAGTGGGTCACACCGTATGTCCAAAAGGGTGTCTTCAATCACATTGCAGATTCAAAGTTGAAGGGGAATTATGATTTGGAACAATTGAAATCTGTGGTCATGATTGCTATGAGATGCACAGATAGTAGCCCAGATAAGAGGCCCAGCATGGTAGAGGTGGTGGATTGGCTTAAGGGTGGTGTTGGGAAGAGAAAAAAACAGATTCCAAATTTGTGTCACAAGCATGGAGGAGACGAAGAGAATGAAGAAAACTATGAAGAGATTGGAACAAAGCCGTCCAAGTTCAAAATACCAAGTGATAATGATAGGCTTAAAATAAGATAA 804 0.4179 MHLKCFCCFLSEEEQSQKRTVEKKNRDYPWEIYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTSKGVEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGEERLIVYDYMPNHSLLTHLHGQLATDCLLDWPKRMCIAIGAAEGLADIVQWVTPYVQKGVFNHIADSKLKGNYDLEQLKSVVMIAMRCTDSSPDKRPSMVEVVDWLKGGVGKRKKQIPNLCHKHGGDEENEENYEEIGTKPSKFKIPSDNDRLKIR 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi93g00125 267 FunFam PTI1-like tyrosine-protein kinase At3g15890 17 120 - -
Sebi93g00125 267 Pfam Protein tyrosine and serine/threonine kinase 46 156 IPR001245 GO:0004672|GO:0006468
Sebi93g00125 267 SUPERFAMILY Protein kinase-like (PK-like) 35 217 IPR011009 -
Sebi93g00125 267 PANTHER OS01G0253100 PROTEIN 159 223 - -
Sebi93g00125 267 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
Sebi93g00125 267 ProSiteProfiles Protein kinase domain profile. 45 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi93g00125 267 MobiDBLite consensus disorder prediction 228 267 - -
Sebi93g00125 267 Gene3D Transferase(Phosphotransferase) domain 1 157 228 - -
Sebi93g00125 267 Gene3D Phosphorylase Kinase; domain 1 6 120 - -
Sebi93g00125 267 MobiDBLite consensus disorder prediction 231 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi93g00125 Sebi-Chr93 1895258 1897711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi93g00125 32 157 Trihelix Transcription Factor Family AT1G68690 45.238 7.80e-30 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Sebi93g00125 PK_Tyr_Ser-Thr 6.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi93g00125 - - gmx:100817283 297.745