Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi93g00122 ATGGCTGCAAGAAAACCAATCACTCCAATGGAAAAGATGGGTTGTGCTCTAGCAACTTATCTCCTTTTGTGTATAGTCTTATCTGCAAATGCTCAATTTGTCAAGAAGACTTACATCATTCAAATGGATAAGTCAGCAATGCCAGACACCTTCTCCAATCACCTGGAGTGGTATTCATCAAAAGTGAAATCAGTACTAACCAAATCAGTAGAAGCTGAGATGGACAATGAAGAGAGAATCATTTACAGTTACCACACTGCTTTTCATGGTGTGGCTGCAAAACTGAGGCAAGAAGAAGCTGAGAAGCTAGAGGCAGAAGAAGGTGTTGTGGCCATATTCCCTGACACAAAGTATCAACTACACACCACAAGAAGTCCAACTTTCCTTGGGCTTGAACCAATGAAAAGCACTAACATCTGGTCAGAAAAACTAGCTAACCATGATGTTATAGTGGGAGTGTTGGACACAGGAATTTGGCCAGAGAGTGAGAGCTTCAATGATACAGGCATAAGACCAGTACCTCCTCACTGGAAAGGTGCCTGTGAGACTGGCCGTGGCTTCAGAAAAAATCACTGCAATAAGAAGATTGTAGGGGCAAGAATATTCTACCTTGGATATGAAGCAGCAACAGGTAAAATTGATGAGCAAACAGAATACAAATCACCAAGAGATCAAGATGGTCATGGCACTCACACTGCAGCTACTGTTGCTGGCTCTCCAGTGCATGGTGCTAATCTTCTAGGCTATGCTTATGGCACAGCCAGAGGAATGGCACCAGGAGCAAGAGTTGCAGCTTACAAAGTGTGCTGGACTGGTGGATGTTTCAGCTCAGATATTCTGTCAGCTGTTGATAGAGCTGTAGCTGATGGAGTGAATGTTCTATCCATTTCTTTGGGTGGTGGAGTCTTATCTTACTACCGTGATAGTTTATCTGTAGCTGCATTTGGAGCAATGGAGAAGGGTGTTTTTGTTTCTTGCTCTGCTGGAAATGCAGGTCCTGACCCTGTCAGTCTTACAAATGTGTCACCTTGGATCACCACAGTTGGAGCAAGCACAATGGATAGAGATTTTCCTGCAGATGTTAAGCTTGGAAATGGAAGAAGTAACTCAAGCAGCCCTGATCCAAAATCTTTGTGCTTGGAAGGAGGTGTGGGAATGATTCTTACAAACACTGCAGCTAATGGAGAAGAGTTGGTTGCAGATTGTCACCTCCTTCCAGCAATTGCAGTTGGAGAGAATGAAGGCAAGGAAATCAAACATTATGTGTTAACAAGTAAAAAAGCTACTGCAACACTAGCTTTTCTTGGTACAAGGTTGGGAATTAGACCATCTCCTGTGGTAGCAGCATTTTCATCAAGAGGGCCTAATTTGCTTACACTTGAAATTCTAAAGCCTGATGTAGTTGCTCCTGGTGTGAACATTCTTGCTGCTTGGAGTGGACTCATTGGTCCATCAAATTTGCCAACAGATCATAGGAGGGTGAAGTTCAATATACTCTCAGGAACTTCAATGTCATGCCCACATGTGAGTGGGATTGCTGCTTTGCTTAAGGCTAGTCATCCAGAATGGAGTCCAGCTGCTATAAAATCTGCATTGATGACAACAGCTTATGTTCATGACAATACCTTCAAGCCTCTAAGAGATGCCTCAGGTGCTGAACCTTCAACTCCATATGATCATGGTGCTGGACACATTAACCCCACAAGAGCTCTTGACCCAGGTTTAGTCTATGATATTGAACCTCAGGATTACTTTGAATTCCTGTGCACACAGAAGCTAACTCCACCACAACTGGGAGTTTTTGCCAAACATTCAAATAGAACTTGCAAGCACTCTCTAGCCAGTCCAGGGGACTTGAACTACCCAGCCATATCAATAGTGTTTCCAGAGAAAACATCCATTTCAGTTTTGACCATTCACAGAACTGCCACCAATGTTGGCCCTCCTGTTTCCAAATACCATGTCATGGTTACACCATTTAAAGGTGCTTCTGTCAAAGTTGAACCAGACACCTTGAATTTCACCAGAAAATACCAGAAACTGTCTTACAAGGTTATCTTCACAGCAAATTCTCGGCAAACTGAACCTGAATTTGGAGGTCTGGTGTGGAAGGATGGTGTGCACAGAGTAAGAAGCCCAATTGTAATAACATATCTTCCACCAATATGA 2169 0.4315 MAARKPITPMEKMGCALATYLLLCIVLSANAQFVKKTYIIQMDKSAMPDTFSNHLEWYSSKVKSVLTKSVEAEMDNEERIIYSYHTAFHGVAAKLRQEEAEKLEAEEGVVAIFPDTKYQLHTTRSPTFLGLEPMKSTNIWSEKLANHDVIVGVLDTGIWPESESFNDTGIRPVPPHWKGACETGRGFRKNHCNKKIVGARIFYLGYEAATGKIDEQTEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMAPGARVAAYKVCWTGGCFSSDILSAVDRAVADGVNVLSISLGGGVLSYYRDSLSVAAFGAMEKGVFVSCSAGNAGPDPVSLTNVSPWITTVGASTMDRDFPADVKLGNGRSNSSSPDPKSLCLEGGVGMILTNTAANGEELVADCHLLPAIAVGENEGKEIKHYVLTSKKATATLAFLGTRLGIRPSPVVAAFSSRGPNLLTLEILKPDVVAPGVNILAAWSGLIGPSNLPTDHRRVKFNILSGTSMSCPHVSGIAALLKASHPEWSPAAIKSALMTTAYVHDNTFKPLRDASGAEPSTPYDHGAGHINPTRALDPGLVYDIEPQDYFEFLCTQKLTPPQLGVFAKHSNRTCKHSLASPGDLNYPAISIVFPEKTSISVLTIHRTATNVGPPVSKYHVMVTPFKGASVKVEPDTLNFTRKYQKLSYKVIFTANSRQTEPEFGGLVWKDGVHRVRSPIVITYLPPI 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi93g00122 722 ProSiteProfiles Serine proteases, subtilase domain profile. 117 571 - -
Sebi93g00122 722 Gene3D Peptidase S8/S53 domain 148 353 IPR036852 GO:0004252|GO:0006508
Sebi93g00122 722 Gene3D Peptidase S8/S53 domain 441 584 IPR036852 GO:0004252|GO:0006508
Sebi93g00122 722 Pfam Peptidase inhibitor I9 37 121 IPR010259 -
Sebi93g00122 722 ProSitePatterns Serine proteases, subtilase family, serine active site. 501 511 IPR023828 -
Sebi93g00122 722 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 121 IPR037045 -
Sebi93g00122 722 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 39 715 IPR045051 -
Sebi93g00122 722 Pfam Subtilase family 148 542 IPR000209 GO:0006508|GO:0008236
Sebi93g00122 722 Gene3D - 380 440 - -
Sebi93g00122 722 Gene3D - 354 368 - -
Sebi93g00122 722 FunFam Subtilisin-like protease SBT1.9 26 121 - -
Sebi93g00122 722 CDD Peptidases_S8_3 118 537 IPR034197 -
Sebi93g00122 722 FunFam Subtilisin-like protease SBT1.5 148 379 - -
Sebi93g00122 722 SUPERFAMILY Subtilisin-like 120 575 IPR036852 GO:0004252|GO:0006508
Sebi93g00122 722 Gene3D - 588 719 - -
Sebi93g00122 722 Pfam Fibronectin type-III domain 618 716 IPR041469 -
Sebi93g00122 722 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Sebi93g00122 722 PRINTS Subtilisin serine protease family (S8) signature 500 516 IPR015500 -
Sebi93g00122 722 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi93g00122 Sebi-Chr93 1822921 1825261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi93g00122 22 722 Subtilisin-like Serine Gene Family AT5G51750 67.273 0.0 1055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi93g00122 - - gmx:102661592 1261.13