Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi93g00108 ATGCAGCTTCTTCACTCCGATGAAACCGCGCCTGAGCCTCGCGACATTCCCCCCAAACCTGACGAGTTGAAGACCCCGAGCGATTCTTCAGAGCCTGGATTGGATGAAGGCGTTGTTCTTGATATATCTGGAAAGAACTTGGAGTTTTCAGCGTCGGAGAAGGTTGAAGACTCCGCGGAGAGTTTATACATGTACAAGAATCTTTACAGTTTGATTCCCAAATCGGTTGGTGGCCTTATGCGGTTGAGAACGATAAAGTTCTTCGGGAATGAGATTAATTTGTTTGCGCCAGAATTCGAGAACATGACGAGGTTGGAATGCTTACAGATGAAGATATCTTCGCCTGGGATTGGTGGATTGCCCTTCCACAAGCTGAAGGGTTTGAAGGAGCTTGAGCTCTCCAAAGGCCCTCCAAGGCCTTCTGCATTTCCCATTCTGACTGAGATTGCTGCTCTCAAATGCCTAACCAAGCTCTCCATTTGTCACTTCTCTATAAGATTCCTTCCTCCGGAAATTGGATGCTTAAAGAATCTGGAGTATCTTGATCTTTCATTCAATAAAATGAAGACATTGCCCTCAGAGATAAGTTTTTTGATTGGCTTAGTATCCATGAAAGTTGCGAATAATAAGTTGGTGGAACTACCGTCAGCTATGACTTCTCTGTCAAGGTTGGAGAGTTTGGACTTGTCAAATAATAGGTTGACTTCATTAGGATCCCTTGAACTTGGCTCAATGCATAGACTTCAGAAGTTAAATCTCCAGTACAACAAGCTGCCCGGCATTTTTCAAATTCCTTCATGGATATGCTGTAATATGGAAGGAAATGATGGGGGTAGATGCAAAGACGATTGTAACAGTTCTTCTGTTGAAATGGATGTCTATGAAAGCAGTTTACAGGAAAATGATGAAACCCATTCTCATGGCCCTCATAATACTTTATCGAGCATATTAACGAGCTCGTCATCTAGCAGATGTTTTGCAGCCCGGAAGTCAGGTAAGCGGTGGAAGCGGCGGCACTATCTACAGCAGAAAGCTCGTCAAGAACGCTTGAACAACAGCAGGAAGTGGAAGGGTGTAGATCAAGACCAGTTGTTGAGCAAGAAGGTTCACAGAATTTCTGAACCAGCAAATCTGGATAGTCTTGCTTCTGAAAATTGCAAAGAAACTGTACCAGACAATGGAAGCCTGGATGACAATAATAAAGCAGCAGTAAATGACAATTTAGTTGATAATGTCAACAATGATGAAGTAATTATTGAAAAGGAAGATTGTGGCACTGCTGAAAGTAAACATGAAAAAGATGCATCTTTATGCTCCTTAAAGAATGGGCAAAGTGAACCGGATGAAGCATCTTGCTCAGATTTTTTGAAATGTATCTCTAAATCAAAGAGGCATTCAGATCGGGATCTTGACAATCCTAAACCATGCAAATCTAGAAAACCAATTGGGGATGATAGCTCATTACTGTCTTGCAAGTACAGTGAAATCTCATTTTGTGGCATTGAGGACCATCTATCAGATGGATTTTATGATGCAGGACGTGATCGGCCATTTATGCCTCTTGAGAGTTATGAGCAAAATCAGTGTCTTGCTTCTCGTGAAGTCATCCTGTTAGACAGAAGGAGAGATGAAGAGTTGGACGCTGTTGTACTCTCTGCTCAGGCATTGGTCTATAATTTGAAGCAGCTAAATGGTTTAAACATTCCTGGGAGCCAGGCTGTGGTTGATAACTTGCAGACAGCATCACTACTTGCACTCTTTGTATCTGATCATTTTGGTGGAAGTGATAGAGGTGCTATTATAGAAAGGACACGGAAATCTGTGTCTGGTTCAAACTATAATAAGCCTTTTGTCTGTACATGCTCGGCTGGAAGCAGCACCAGTACAAGTGCTTCCTCTGAACCAGTTGTAAACACTGTAGAAGATATTGCTCTTTCTAAGATCTCTGAAAAATCTCTTAATTCTATCAAAAGAAGGCGAAATTCAGTTGTAGTTCCAATTGGCTCTGTGCAGTATGGTGTATGTAGACATAGATCTCTTCTTTTTAAGTATTTATGTGATCACATGGAGCCACCTATACCTTGTGAGCTTGTTAGGGGTTACCTGGATTTTTTACCACATGCCTGGAATATCATTCTGATAAAGAGGGGTGCTACATGGGTTCGAATGCTTGTTGATGCTTGCCGACCTCATGATATAAGAGAAGAGAGAGATCCTGAATACTCCTGCAGGTACATACCCCTTAGTCGGCCCAAAATCCCTCCTCCATCTAGTAGTCATATTGGTCCTGATTATTCTTTTCCATCTCTCTCTACATGTGATGAACTTGAGAAAAAAGCTGTGACTACTTTAGTTCGTTGCAAATTTGGATCAGTTGAGGCTGCAGCAAAGGTGCGTACTTTGGAAGTGCAGGAGAGTTCAGCAGATAAAATTAAAAATTTTGAATATAATTGTTTGGGAGAAATTAGAATTCTTGGTGCTTTAAAACACCCCTGCATAGTGGAAATGTATGGACACCGAATATCATGTGAATGGACCATCTCAGCTGATGGTAAATCAGAGCATCGTGTATTAAGATCTGCCATTTTTATGGAATACGTTGAAGGTGGCTCCTTAAAAAGGTATCTAGAGAAGCTGTCAGGAGCTGGCGAAAAGCATGTTCCTATGGAGTTGGCTTTGTATATTGCCAAAGATGTCTCATGTGCTTTGTTGGAGCTGCACTCGAAACATATAATTCATCGTGACATAAAAAGTGAAAACATTCTATGTGATTTTGATAGGAAGAGAGATGATGGAACTCCCATTGTGAAGCTATGTGATTTTGATAGTGCAGTGCCACTAAGATCACCCTTACATGTATGCTGTATTGCTCATGTGGGAACACCACCTCCTTGTGTGTGTGTTGGAACACCTCGATGGATGGCCCCAGAGGTCATGCGGACTATGTATGAAAAAAACACTTATGGACTGGAAGCTGATATTTGGTCGTTTGGATGTTTACTTTTGGAGATGCTGACGTTGCAAATTCCATATTTTGGAGTACCTGATTCACACATCCATGATAGTCTGCAGATGGGTAAACGACCACAATTAAGTGATGAGCTGGAGACATTAAGTTCAATGAATGAACCCACAATGATTCATTCTGGGGAAGAGACGGAAAAATCAGATTCTGAAATAGGTACTTTGAAGTTCCTTGTTGATTTGTTTCATAGATGTGTGGAAGAAAATCCAAATGAACGACCTACTGCTGAAGAAATCCATGAAATGCTGGTTGGACATACAAAGCACCGACAAGGTCAACAAGATGTTGGTAAGATTTAG 3324 0.4143 MQLLHSDETAPEPRDIPPKPDELKTPSDSSEPGLDEGVVLDISGKNLEFSASEKVEDSAESLYMYKNLYSLIPKSVGGLMRLRTIKFFGNEINLFAPEFENMTRLECLQMKISSPGIGGLPFHKLKGLKELELSKGPPRPSAFPILTEIAALKCLTKLSICHFSIRFLPPEIGCLKNLEYLDLSFNKMKTLPSEISFLIGLVSMKVANNKLVELPSAMTSLSRLESLDLSNNRLTSLGSLELGSMHRLQKLNLQYNKLPGIFQIPSWICCNMEGNDGGRCKDDCNSSSVEMDVYESSLQENDETHSHGPHNTLSSILTSSSSSRCFAARKSGKRWKRRHYLQQKARQERLNNSRKWKGVDQDQLLSKKVHRISEPANLDSLASENCKETVPDNGSLDDNNKAAVNDNLVDNVNNDEVIIEKEDCGTAESKHEKDASLCSLKNGQSEPDEASCSDFLKCISKSKRHSDRDLDNPKPCKSRKPIGDDSSLLSCKYSEISFCGIEDHLSDGFYDAGRDRPFMPLESYEQNQCLASREVILLDRRRDEELDAVVLSAQALVYNLKQLNGLNIPGSQAVVDNLQTASLLALFVSDHFGGSDRGAIIERTRKSVSGSNYNKPFVCTCSAGSSTSTSASSEPVVNTVEDIALSKISEKSLNSIKRRRNSVVVPIGSVQYGVCRHRSLLFKYLCDHMEPPIPCELVRGYLDFLPHAWNIILIKRGATWVRMLVDACRPHDIREERDPEYSCRYIPLSRPKIPPPSSSHIGPDYSFPSLSTCDELEKKAVTTLVRCKFGSVEAAAKVRTLEVQESSADKIKNFEYNCLGEIRILGALKHPCIVEMYGHRISCEWTISADGKSEHRVLRSAIFMEYVEGGSLKRYLEKLSGAGEKHVPMELALYIAKDVSCALLELHSKHIIHRDIKSENILCDFDRKRDDGTPIVKLCDFDSAVPLRSPLHVCCIAHVGTPPPCVCVGTPRWMAPEVMRTMYEKNTYGLEADIWSFGCLLLEMLTLQIPYFGVPDSHIHDSLQMGKRPQLSDELETLSSMNEPTMIHSGEETEKSDSEIGTLKFLVDLFHRCVEENPNERPTAEEIHEMLVGHTKHRQGQQDVGKI 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi93g00108 1107 SMART LRR_typ_2 175 198 IPR003591 -
Sebi93g00108 1107 SMART LRR_typ_2 221 244 IPR003591 -
Sebi93g00108 1107 SMART LRR_typ_2 245 271 IPR003591 -
Sebi93g00108 1107 ProSitePatterns Serine/Threonine protein kinases active-site signature. 911 923 IPR008271 GO:0004672|GO:0006468
Sebi93g00108 1107 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 105 1097 - -
Sebi93g00108 1107 Pfam Leucine rich repeat 201 258 IPR001611 GO:0005515
Sebi93g00108 1107 Gene3D Ribonuclease Inhibitor 29 279 IPR032675 -
Sebi93g00108 1107 PRINTS Leucine-rich repeat signature 221 234 - -
Sebi93g00108 1107 PRINTS Leucine-rich repeat signature 178 191 - -
Sebi93g00108 1107 SUPERFAMILY Protein kinase-like (PK-like) 783 1091 IPR011009 -
Sebi93g00108 1107 SMART serkin_6 774 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi93g00108 1107 SMART LRR_bac_2 198 217 - -
Sebi93g00108 1107 SMART LRR_bac_2 175 194 - -
Sebi93g00108 1107 SMART LRR_bac_2 221 240 - -
Sebi93g00108 1107 ProSiteProfiles Leucine-rich repeat profile. 177 198 IPR001611 GO:0005515
Sebi93g00108 1107 Pfam Ethylene-responsive protein kinase Le-CTR1 645 726 - -
Sebi93g00108 1107 Gene3D Transferase(Phosphotransferase) domain 1 774 1105 - -
Sebi93g00108 1107 MobiDBLite consensus disorder prediction 1 37 - -
Sebi93g00108 1107 SUPERFAMILY RNI-like 40 267 - -
Sebi93g00108 1107 SMART LRR_sd22_2 221 242 - -
Sebi93g00108 1107 SMART LRR_sd22_2 175 197 - -
Sebi93g00108 1107 FunFam Leucine-rich repeat protein kinase family protein 48 291 - -
Sebi93g00108 1107 ProSiteProfiles Protein kinase domain profile. 778 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi93g00108 1107 Pfam Protein kinase domain 806 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi93g00108 1107 ProSiteProfiles Leucine-rich repeat profile. 223 244 IPR001611 GO:0005515
Sebi93g00108 1107 MobiDBLite consensus disorder prediction 8 29 - -
Sebi93g00108 1107 FunFam Leucine-rich repeat protein kinase family protein 816 1097 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi93g00108 Sebi-Chr93 1528277 1535880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi93g00108 786 1094 MAP Kinase Kinase Kinase AT5G66850 28.793 3.98e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Sebi93g00108 Pkinase 1.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi93g00108 - - gmx:100819959 1761.89