Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi93g00108 | ATGCAGCTTCTTCACTCCGATGAAACCGCGCCTGAGCCTCGCGACATTCCCCCCAAACCTGACGAGTTGAAGACCCCGAGCGATTCTTCAGAGCCTGGATTGGATGAAGGCGTTGTTCTTGATATATCTGGAAAGAACTTGGAGTTTTCAGCGTCGGAGAAGGTTGAAGACTCCGCGGAGAGTTTATACATGTACAAGAATCTTTACAGTTTGATTCCCAAATCGGTTGGTGGCCTTATGCGGTTGAGAACGATAAAGTTCTTCGGGAATGAGATTAATTTGTTTGCGCCAGAATTCGAGAACATGACGAGGTTGGAATGCTTACAGATGAAGATATCTTCGCCTGGGATTGGTGGATTGCCCTTCCACAAGCTGAAGGGTTTGAAGGAGCTTGAGCTCTCCAAAGGCCCTCCAAGGCCTTCTGCATTTCCCATTCTGACTGAGATTGCTGCTCTCAAATGCCTAACCAAGCTCTCCATTTGTCACTTCTCTATAAGATTCCTTCCTCCGGAAATTGGATGCTTAAAGAATCTGGAGTATCTTGATCTTTCATTCAATAAAATGAAGACATTGCCCTCAGAGATAAGTTTTTTGATTGGCTTAGTATCCATGAAAGTTGCGAATAATAAGTTGGTGGAACTACCGTCAGCTATGACTTCTCTGTCAAGGTTGGAGAGTTTGGACTTGTCAAATAATAGGTTGACTTCATTAGGATCCCTTGAACTTGGCTCAATGCATAGACTTCAGAAGTTAAATCTCCAGTACAACAAGCTGCCCGGCATTTTTCAAATTCCTTCATGGATATGCTGTAATATGGAAGGAAATGATGGGGGTAGATGCAAAGACGATTGTAACAGTTCTTCTGTTGAAATGGATGTCTATGAAAGCAGTTTACAGGAAAATGATGAAACCCATTCTCATGGCCCTCATAATACTTTATCGAGCATATTAACGAGCTCGTCATCTAGCAGATGTTTTGCAGCCCGGAAGTCAGGTAAGCGGTGGAAGCGGCGGCACTATCTACAGCAGAAAGCTCGTCAAGAACGCTTGAACAACAGCAGGAAGTGGAAGGGTGTAGATCAAGACCAGTTGTTGAGCAAGAAGGTTCACAGAATTTCTGAACCAGCAAATCTGGATAGTCTTGCTTCTGAAAATTGCAAAGAAACTGTACCAGACAATGGAAGCCTGGATGACAATAATAAAGCAGCAGTAAATGACAATTTAGTTGATAATGTCAACAATGATGAAGTAATTATTGAAAAGGAAGATTGTGGCACTGCTGAAAGTAAACATGAAAAAGATGCATCTTTATGCTCCTTAAAGAATGGGCAAAGTGAACCGGATGAAGCATCTTGCTCAGATTTTTTGAAATGTATCTCTAAATCAAAGAGGCATTCAGATCGGGATCTTGACAATCCTAAACCATGCAAATCTAGAAAACCAATTGGGGATGATAGCTCATTACTGTCTTGCAAGTACAGTGAAATCTCATTTTGTGGCATTGAGGACCATCTATCAGATGGATTTTATGATGCAGGACGTGATCGGCCATTTATGCCTCTTGAGAGTTATGAGCAAAATCAGTGTCTTGCTTCTCGTGAAGTCATCCTGTTAGACAGAAGGAGAGATGAAGAGTTGGACGCTGTTGTACTCTCTGCTCAGGCATTGGTCTATAATTTGAAGCAGCTAAATGGTTTAAACATTCCTGGGAGCCAGGCTGTGGTTGATAACTTGCAGACAGCATCACTACTTGCACTCTTTGTATCTGATCATTTTGGTGGAAGTGATAGAGGTGCTATTATAGAAAGGACACGGAAATCTGTGTCTGGTTCAAACTATAATAAGCCTTTTGTCTGTACATGCTCGGCTGGAAGCAGCACCAGTACAAGTGCTTCCTCTGAACCAGTTGTAAACACTGTAGAAGATATTGCTCTTTCTAAGATCTCTGAAAAATCTCTTAATTCTATCAAAAGAAGGCGAAATTCAGTTGTAGTTCCAATTGGCTCTGTGCAGTATGGTGTATGTAGACATAGATCTCTTCTTTTTAAGTATTTATGTGATCACATGGAGCCACCTATACCTTGTGAGCTTGTTAGGGGTTACCTGGATTTTTTACCACATGCCTGGAATATCATTCTGATAAAGAGGGGTGCTACATGGGTTCGAATGCTTGTTGATGCTTGCCGACCTCATGATATAAGAGAAGAGAGAGATCCTGAATACTCCTGCAGGTACATACCCCTTAGTCGGCCCAAAATCCCTCCTCCATCTAGTAGTCATATTGGTCCTGATTATTCTTTTCCATCTCTCTCTACATGTGATGAACTTGAGAAAAAAGCTGTGACTACTTTAGTTCGTTGCAAATTTGGATCAGTTGAGGCTGCAGCAAAGGTGCGTACTTTGGAAGTGCAGGAGAGTTCAGCAGATAAAATTAAAAATTTTGAATATAATTGTTTGGGAGAAATTAGAATTCTTGGTGCTTTAAAACACCCCTGCATAGTGGAAATGTATGGACACCGAATATCATGTGAATGGACCATCTCAGCTGATGGTAAATCAGAGCATCGTGTATTAAGATCTGCCATTTTTATGGAATACGTTGAAGGTGGCTCCTTAAAAAGGTATCTAGAGAAGCTGTCAGGAGCTGGCGAAAAGCATGTTCCTATGGAGTTGGCTTTGTATATTGCCAAAGATGTCTCATGTGCTTTGTTGGAGCTGCACTCGAAACATATAATTCATCGTGACATAAAAAGTGAAAACATTCTATGTGATTTTGATAGGAAGAGAGATGATGGAACTCCCATTGTGAAGCTATGTGATTTTGATAGTGCAGTGCCACTAAGATCACCCTTACATGTATGCTGTATTGCTCATGTGGGAACACCACCTCCTTGTGTGTGTGTTGGAACACCTCGATGGATGGCCCCAGAGGTCATGCGGACTATGTATGAAAAAAACACTTATGGACTGGAAGCTGATATTTGGTCGTTTGGATGTTTACTTTTGGAGATGCTGACGTTGCAAATTCCATATTTTGGAGTACCTGATTCACACATCCATGATAGTCTGCAGATGGGTAAACGACCACAATTAAGTGATGAGCTGGAGACATTAAGTTCAATGAATGAACCCACAATGATTCATTCTGGGGAAGAGACGGAAAAATCAGATTCTGAAATAGGTACTTTGAAGTTCCTTGTTGATTTGTTTCATAGATGTGTGGAAGAAAATCCAAATGAACGACCTACTGCTGAAGAAATCCATGAAATGCTGGTTGGACATACAAAGCACCGACAAGGTCAACAAGATGTTGGTAAGATTTAG | 3324 | 0.4143 | MQLLHSDETAPEPRDIPPKPDELKTPSDSSEPGLDEGVVLDISGKNLEFSASEKVEDSAESLYMYKNLYSLIPKSVGGLMRLRTIKFFGNEINLFAPEFENMTRLECLQMKISSPGIGGLPFHKLKGLKELELSKGPPRPSAFPILTEIAALKCLTKLSICHFSIRFLPPEIGCLKNLEYLDLSFNKMKTLPSEISFLIGLVSMKVANNKLVELPSAMTSLSRLESLDLSNNRLTSLGSLELGSMHRLQKLNLQYNKLPGIFQIPSWICCNMEGNDGGRCKDDCNSSSVEMDVYESSLQENDETHSHGPHNTLSSILTSSSSSRCFAARKSGKRWKRRHYLQQKARQERLNNSRKWKGVDQDQLLSKKVHRISEPANLDSLASENCKETVPDNGSLDDNNKAAVNDNLVDNVNNDEVIIEKEDCGTAESKHEKDASLCSLKNGQSEPDEASCSDFLKCISKSKRHSDRDLDNPKPCKSRKPIGDDSSLLSCKYSEISFCGIEDHLSDGFYDAGRDRPFMPLESYEQNQCLASREVILLDRRRDEELDAVVLSAQALVYNLKQLNGLNIPGSQAVVDNLQTASLLALFVSDHFGGSDRGAIIERTRKSVSGSNYNKPFVCTCSAGSSTSTSASSEPVVNTVEDIALSKISEKSLNSIKRRRNSVVVPIGSVQYGVCRHRSLLFKYLCDHMEPPIPCELVRGYLDFLPHAWNIILIKRGATWVRMLVDACRPHDIREERDPEYSCRYIPLSRPKIPPPSSSHIGPDYSFPSLSTCDELEKKAVTTLVRCKFGSVEAAAKVRTLEVQESSADKIKNFEYNCLGEIRILGALKHPCIVEMYGHRISCEWTISADGKSEHRVLRSAIFMEYVEGGSLKRYLEKLSGAGEKHVPMELALYIAKDVSCALLELHSKHIIHRDIKSENILCDFDRKRDDGTPIVKLCDFDSAVPLRSPLHVCCIAHVGTPPPCVCVGTPRWMAPEVMRTMYEKNTYGLEADIWSFGCLLLEMLTLQIPYFGVPDSHIHDSLQMGKRPQLSDELETLSSMNEPTMIHSGEETEKSDSEIGTLKFLVDLFHRCVEENPNERPTAEEIHEMLVGHTKHRQGQQDVGKI | 1107 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi93g00108 | 1107 | SMART | LRR_typ_2 | 175 | 198 | IPR003591 | - | |
Sebi93g00108 | 1107 | SMART | LRR_typ_2 | 221 | 244 | IPR003591 | - | |
Sebi93g00108 | 1107 | SMART | LRR_typ_2 | 245 | 271 | IPR003591 | - | |
Sebi93g00108 | 1107 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 911 | 923 | IPR008271 | GO:0004672|GO:0006468 | |
Sebi93g00108 | 1107 | PANTHER | SERINE/THREONINE-PROTEIN KINASE SBK1 | 105 | 1097 | - | - | |
Sebi93g00108 | 1107 | Pfam | Leucine rich repeat | 201 | 258 | IPR001611 | GO:0005515 | |
Sebi93g00108 | 1107 | Gene3D | Ribonuclease Inhibitor | 29 | 279 | IPR032675 | - | |
Sebi93g00108 | 1107 | PRINTS | Leucine-rich repeat signature | 221 | 234 | - | - | |
Sebi93g00108 | 1107 | PRINTS | Leucine-rich repeat signature | 178 | 191 | - | - | |
Sebi93g00108 | 1107 | SUPERFAMILY | Protein kinase-like (PK-like) | 783 | 1091 | IPR011009 | - | |
Sebi93g00108 | 1107 | SMART | serkin_6 | 774 | 1091 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sebi93g00108 | 1107 | SMART | LRR_bac_2 | 198 | 217 | - | - | |
Sebi93g00108 | 1107 | SMART | LRR_bac_2 | 175 | 194 | - | - | |
Sebi93g00108 | 1107 | SMART | LRR_bac_2 | 221 | 240 | - | - | |
Sebi93g00108 | 1107 | ProSiteProfiles | Leucine-rich repeat profile. | 177 | 198 | IPR001611 | GO:0005515 | |
Sebi93g00108 | 1107 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 645 | 726 | - | - | |
Sebi93g00108 | 1107 | Gene3D | Transferase(Phosphotransferase) domain 1 | 774 | 1105 | - | - | |
Sebi93g00108 | 1107 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Sebi93g00108 | 1107 | SUPERFAMILY | RNI-like | 40 | 267 | - | - | |
Sebi93g00108 | 1107 | SMART | LRR_sd22_2 | 221 | 242 | - | - | |
Sebi93g00108 | 1107 | SMART | LRR_sd22_2 | 175 | 197 | - | - | |
Sebi93g00108 | 1107 | FunFam | Leucine-rich repeat protein kinase family protein | 48 | 291 | - | - | |
Sebi93g00108 | 1107 | ProSiteProfiles | Protein kinase domain profile. | 778 | 1091 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sebi93g00108 | 1107 | Pfam | Protein kinase domain | 806 | 1089 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sebi93g00108 | 1107 | ProSiteProfiles | Leucine-rich repeat profile. | 223 | 244 | IPR001611 | GO:0005515 | |
Sebi93g00108 | 1107 | MobiDBLite | consensus disorder prediction | 8 | 29 | - | - | |
Sebi93g00108 | 1107 | FunFam | Leucine-rich repeat protein kinase family protein | 816 | 1097 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi93g00108 | Sebi-Chr93 | 1528277 | 1535880 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi93g00108 | 786 | 1094 | MAP Kinase Kinase Kinase | AT5G66850 | 28.793 | 3.98e-22 | 100 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-2 | Sebi93g00108 | Pkinase | 1.4e-39 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi93g00108 | - | - | gmx:100819959 | 1761.89 |