Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi93g00091 ATGATGGCTTCTCATTCCTCAAAAAAAGAAGGCCTTAATAATTATGGTCTTTCTATACCATTCTGGGTCTCCCTCATTGTGATTCTCATCTCCATCAACCCCTCACACCAAACTACTGAATACCCTTCTTCCCCTTTCCCCCAACTAAACCCAAGGCTCTCTAAAGCTTACACAGCCCTCCAAGCATGGAAACACTCAATCACCTCCGACCCCAAAAACTTCACCTCTAACTGGCGTGGTCCCCATGTATGCAACTACACTGGTATCTACTGTGCACCAGCACCAGATGACCCTCACATGTATACAGTTGCTGGAATAGACTTAAACCATGGCAACATAGCTGGTTCATTGCCAGAGGAACTTGGTCTCTTAACTGATCTAGCCCTTTTCCACATAAACTCCAACCGCTTCTGTGGTTCACTCCCAAGTAGCTTTAGCAACCTTCACCTTCTCTTTGAGCTAGATATCAGCAACAACCAATTCTCAGGACCATTCCCTGAGGTTGTTCTCTGTCTTCCTTCACTGAAATTCTTGGATATCAGATTCAATGGGTTCCAAGGCAATGTTCCTTCCCGCCTTTTCGACCTTAAACTTGATGCTCTGTTCATCAACAACAACAAATTTCAATTCTCTTTGCCTGAAAACTTTGGAAACAGTCCTGCTTCTGTGGTCGTGTTTGCAAACAATGACCTCAAGGGTTGTATTCCATCAAGTTTGGCGAAAATGAAGGATACTCTTAATGAGATTATCATAATGAATAGTGGGTTAAGGGGTTGTTTGCCAGCGGAAATTGGGGATTTGGAGAAAGTGACGGTGTTTGATGTGAGTTTCAACAAGTTGGTTGGGGAATTGCCAGAGTCAATGGGAAGGATGAAGAGTTTGGAGCAGTTAAATGTGGCGCATAACAAGTTGTATGGTACAATTCCAGAGAGTATATGCAAGTTGCCAAGGTTGGAGAATTTCACATATTCATACAACTACTTCTGTAGTGAATCACCAGTGTGTCTGAAATTGCCAGATAAGGATGATCGTAAGAATTGTATTCCTTATAGGCCATTGCAAAGGAGCCTTGCTTTGAGAAGATTTGGATTGCTATGCGTACCTTTGCAAGTTGCTACAGAATACAGCATACGAAAATAA 1140 0.4263 MMASHSSKKEGLNNYGLSIPFWVSLIVILISINPSHQTTEYPSSPFPQLNPRLSKAYTALQAWKHSITSDPKNFTSNWRGPHVCNYTGIYCAPAPDDPHMYTVAGIDLNHGNIAGSLPEELGLLTDLALFHINSNRFCGSLPSSFSNLHLLFELDISNNQFSGPFPEVVLCLPSLKFLDIRFNGFQGNVPSRLFDLKLDALFINNNKFQFSLPENFGNSPASVVVFANNDLKGCIPSSLAKMKDTLNEIIIMNSGLRGCLPAEIGDLEKVTVFDVSFNKLVGELPESMGRMKSLEQLNVAHNKLYGTIPESICKLPRLENFTYSYNYFCSESPVCLKLPDKDDRKNCIPYRPLQRSLALRRFGLLCVPLQVATEYSIRK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi93g00091 379 FunFam Leucine-rich repeat extensin-like protein 1 57 218 - -
Sebi93g00091 379 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 33 356 - -
Sebi93g00091 379 FunFam Leucine-rich repeat extensin-like protein 5 219 359 - -
Sebi93g00091 379 SUPERFAMILY L domain-like 56 337 - -
Sebi93g00091 379 Gene3D Ribonuclease Inhibitor 222 347 IPR032675 -
Sebi93g00091 379 Gene3D Ribonuclease Inhibitor 54 221 IPR032675 -
Sebi93g00091 379 Pfam Leucine rich repeat N-terminal domain 57 91 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi93g00091 Sebi-Chr93 1288419 1290110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi93g00091 47 358 Leucine-rich Repeat extension Gene Families AT3G22800 71.565 2.96e-159 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi93g00091 - - gmx:100818195 585.874