Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi93g00086 ATGAAATGGACACTCCCGAGAGATTTGAGAGCATATATCAGTAAGGCAAGGCATAACCTTTTGGGCCCATCAAAGCCTAAGGTTTCATCTGAAGATGTAAATAAAATATCTTCACATGAAGAGGCTCCTACAGATACAACCCATGCTTGTCATGACTCAATTGAAACATCTAGTGAACACATTGAGCTTCCACAAGCCTTAAATTATAATTCTGGAAGCCTTGGATATGATCCTCTACCTCTACTTTGCGGTGATGAGGCTAACTCTCTTCTAGAATTGCCTGGCGAGCCAGCATCAGATGTCAGCTATGTTCAGGAAGGCCTTAAAAATGTTTCAGTTGAGGGTGAAACCCATCTTAAGGCATTATGTCAGCTTGAGGCAAAAATTGAAGGCCCAGACTGTGATTTGGATACTTTAATTACTGATGCCTCTGATCTGTTAATTTTTAGGTCCCCAAATGTGCCACAGGCTTTTAAGGGCCTAATGAATAAACAACTGGATCCTTCGATACTGCTTAGCAATTTTATGACTCTGTTACCACAATCTACAGCTAATAATGGTCATGAAATGCATGTCGTTAATCCAATTGCTTCTGGTTTAGAACATGAAATTGTAGACTATCCTTCTGAACCAATAGCAGCCACAGATGCAGGTCAGACACAGGATAATCTTGCCAATGTTGCTTTGATGGCTAGCAATCCAAGTGAGAAAGTGGATAATCAGGTTGTTTATGTGACACACCCGAGGCGCAGTCTAGACTTTGAGATGGCCAGTGTGCAAAGGAAAAATACAGGTGATAGTTCAAACATCAATTCCAGTGCAGCAAGGTCTGATGAGAGGGATGTTGGTAATATGAAACACACTGGTGATCCACGGAAATGTGTTTTGCCGAGAATTGGTTTGCACTTGAATGCACTTGCAACCTTAAAATATTACAAAAGTATAAAAAGTGAAATGGTGTCTTCTGAAAGGCAACCTAATCTGCCCAGCTCTACTTCCTTGCATCTCCCTGCAAACCAAGAGCATCACCTATCATCAGTACCTCCATCAATGGAAAGAGATTTGGAGCCATCTAAAAATGAGGTTCAGCCCATGGAAAATTGTACCCAGTCATCAGTTTACATGGCTGGTGAAGATTTCCATCAGAATAGCCCCAAAAAGAAAAGGAAAGCGCAAGTTGGAATCAGCTGGGGAAGGGGAGTCCTCATTAAGAGTAGTTACTGTGAGTGCTTTGCTGCTGGAGTCTTCTGTAAAGAACCTTGCTTATGTCAGGACTGTTTCAACAAACCTATTCATGAAAATACTGTTACTCAAACTCGCAAGCAGATCCTGTCTCGTAACCCACTTGCGTTTGCTCCTAAAGTCATAAGGAGTTCTGATTCTGCACCTGAAATTGGGGAACCTAACAGAACTCCAGATTCAGCACGACATAAAAGAGGATGCAATTGCAAGAAATCAAGCTGCCTGAAGAAATATTGTGAATGTTATCAGGGTGGTGTTGGTTGCTCCGTTAGCTGCAGATGTGAAGGGTGCAAGAACACATATGGTAGAAAGGATGGTTCTCCTCCTACTGAAAGAGTAGCTGAACCTGAAGAAGAAACAAATGCATATGAAAAGGGTGTGGTGGAAAGAGCTTCACAGAAAATTGAAATTCAGAATATCAATGACCATCCAGATTGTGCTCTTACCACAACACCATCACAGCTTTCTAGATCATTGCTTCCGTTACCCTTTGATGCATCAAAGGGAAAGCATCCAAGATCTTTTGTTACTACCATCCCCTCTTCTGGATATTTTGGCAGCCAAAAGCTTGGGAATTCAAATGCTTTTGGATTTCAGCCCAAGTTTGAAAAGGCTCTTGAAACTGTTCCAGATGATGTCTCTCCAATCACTTGCATCAAAACTTCTTCCCCGAATGGCAAGAGGATCTCCTCTCTTAATTGTGCCTCTGGATCATCATCTCCTACTCGCAGAGGTAGCAGGAAGATGATATTAAAATCCATCCCGTCATTTCCTGCTCTCACCCATCACCATTAG 2037 0.4202 MKWTLPRDLRAYISKARHNLLGPSKPKVSSEDVNKISSHEEAPTDTTHACHDSIETSSEHIELPQALNYNSGSLGYDPLPLLCGDEANSLLELPGEPASDVSYVQEGLKNVSVEGETHLKALCQLEAKIEGPDCDLDTLITDASDLLIFRSPNVPQAFKGLMNKQLDPSILLSNFMTLLPQSTANNGHEMHVVNPIASGLEHEIVDYPSEPIAATDAGQTQDNLANVALMASNPSEKVDNQVVYVTHPRRSLDFEMASVQRKNTGDSSNINSSAARSDERDVGNMKHTGDPRKCVLPRIGLHLNALATLKYYKSIKSEMVSSERQPNLPSSTSLHLPANQEHHLSSVPPSMERDLEPSKNEVQPMENCTQSSVYMAGEDFHQNSPKKKRKAQVGISWGRGVLIKSSYCECFAAGVFCKEPCLCQDCFNKPIHENTVTQTRKQILSRNPLAFAPKVIRSSDSAPEIGEPNRTPDSARHKRGCNCKKSSCLKKYCECYQGGVGCSVSCRCEGCKNTYGRKDGSPPTERVAEPEEETNAYEKGVVERASQKIEIQNINDHPDCALTTTPSQLSRSLLPLPFDASKGKHPRSFVTTIPSSGYFGSQKLGNSNAFGFQPKFEKALETVPDDVSPITCIKTSSPNGKRISSLNCASGSSSPTRRGSRKMILKSIPSFPALTHHH 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi93g00086 678 MobiDBLite consensus disorder prediction 516 535 - -
Sebi93g00086 678 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 16 675 IPR044522 GO:0003700
Sebi93g00086 678 MobiDBLite consensus disorder prediction 22 48 - -
Sebi93g00086 678 MobiDBLite consensus disorder prediction 638 661 - -
Sebi93g00086 678 MobiDBLite consensus disorder prediction 260 278 - -
Sebi93g00086 678 MobiDBLite consensus disorder prediction 322 361 - -
Sebi93g00086 678 MobiDBLite consensus disorder prediction 322 346 - -
Sebi93g00086 678 MobiDBLite consensus disorder prediction 458 480 - -
Sebi93g00086 678 ProSiteProfiles CRC domain profile. 397 516 IPR005172 -
Sebi93g00086 678 MobiDBLite consensus disorder prediction 260 289 - -
Sebi93g00086 678 MobiDBLite consensus disorder prediction 32 48 - -
Sebi93g00086 678 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 406 429 IPR005172 -
Sebi93g00086 678 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 479 514 IPR005172 -
Sebi93g00086 678 SMART CXC_2 476 517 IPR033467 -
Sebi93g00086 678 SMART CXC_2 390 432 IPR033467 -
Sebi93g00086 678 MobiDBLite consensus disorder prediction 638 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi93g00086 Sebi-Chr93 1239585 1245395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi93g00086 125 678 CPP Transcription Factor Family AT4G14770 40.893 1.80e-94 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Sebi93g00086 TCR 2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi93g00086 - - gmx:100811662 824.313