Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi93g00085 ATGCATTCGGAAGGTGGGGGTGTTAGTACCACAAAGACGGAATCGGAAGCTGCTACTTTGAATTCAAAAATGAAAGGCAGTGGAAATCAAAGCAGTAAAAATATGGTTCTCAGAGCTGACAAAATTGATCTCAAGAGCTTGGATGCTGCACTTGAAAAGCACTTGAGCAGAGTCTTTTCCAGAAGCATTGAGGCAAAAAGGCCTAAAGAAGAATGGGAGATTGATCTGTCCATGTTGAATTTACGATATGTTATTGCTAAAGGGGCCTATGTGAAAGTGTTAGACTGGGGTGAGGATGGTGTTTCAAGTGCTGCGGAAACCGCTGCTTTACGAGCAGCATTTCGCCAGGAGGTTACTGTTTGGCATAAAGTTGATCATCCAAACGTCACAAAATTCATTGGAGCTTCAATGGGCACTTCAAATCTTAAGATATCTTTACGAGCTGGTGGTCAAGATTCGATTCCTTCCATGTCATGTTGTGTTATTGTTGAGTTTCTTCCCGGTGGGACGCTGAAACAATACTTGTTTAAGAATAGACGAAAGAAACTTGCCTATAAGGCTGTGATTCAGCTGGCTTTGGACCTCGCTAGAGGTCTTAGTTATCTACATTCGATGAAAATTGTTCATCGCGATGTAAAAAGTGATAACATGTTGTTAGATGCTAATCAAAAATTGAAAATAGCTGATTTTGGAGTTGCTCGGATTGAAGCTCAAAATCCGAGTGAAATGACAGGGGAAACTGGAACCATTGGATATATGGCACCAGAGGTTCTGGGTGGCAAGCCTTACAACAGAAAATGTGATGTCTATAGCTTTGGCATTTGCTTGTGGGAAATTTATTGCTGTGACATGCCTTATCCAAATCTAAGCTTTGTTGATGTGTCCTCTGCCGTTGTTCGTCAGAATTTACGACCAGATATTCCAAGATGTTGCCCAAGTGCCTTAGCAAATATAATGAGAAAGTGCTGGGATAAAAAAGCAGAGAAGCGTCCAGAAATGCATGAGGTGGTGAGAATGTTGGAAGCAATTGATACGAGCAAAGGAGGTGGAATGATACCAGAAGACAAGACTCCATTTTGTTTTTGTTTTATACCGACTCGTGGTCCATAA 1110 0.4144 MHSEGGGVSTTKTESEAATLNSKMKGSGNQSSKNMVLRADKIDLKSLDAALEKHLSRVFSRSIEAKRPKEEWEIDLSMLNLRYVIAKGAYVKVLDWGEDGVSSAAETAALRAAFRQEVTVWHKVDHPNVTKFIGASMGTSNLKISLRAGGQDSIPSMSCCVIVEFLPGGTLKQYLFKNRRKKLAYKAVIQLALDLARGLSYLHSMKIVHRDVKSDNMLLDANQKLKIADFGVARIEAQNPSEMTGETGTIGYMAPEVLGGKPYNRKCDVYSFGICLWEIYCCDMPYPNLSFVDVSSAVVRQNLRPDIPRCCPSALANIMRKCWDKKAEKRPEMHEVVRMLEAIDTSKGGGMIPEDKTPFCFCFIPTRGP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi93g00085 369 MobiDBLite consensus disorder prediction 1 33 - -
Sebi93g00085 369 SUPERFAMILY Protein kinase-like (PK-like) 68 340 IPR011009 -
Sebi93g00085 369 ProSiteProfiles Protein kinase domain profile. 79 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi93g00085 369 Gene3D Transferase(Phosphotransferase) domain 1 168 351 - -
Sebi93g00085 369 Gene3D Phosphorylase Kinase; domain 1 59 146 - -
Sebi93g00085 369 Pfam Protein tyrosine and serine/threonine kinase 108 340 IPR001245 GO:0004672|GO:0006468
Sebi93g00085 369 PRINTS Tyrosine kinase catalytic domain signature 163 176 IPR001245 GO:0004672|GO:0006468
Sebi93g00085 369 PRINTS Tyrosine kinase catalytic domain signature 267 289 IPR001245 GO:0004672|GO:0006468
Sebi93g00085 369 PRINTS Tyrosine kinase catalytic domain signature 201 219 IPR001245 GO:0004672|GO:0006468
Sebi93g00085 369 PRINTS Tyrosine kinase catalytic domain signature 311 333 IPR001245 GO:0004672|GO:0006468
Sebi93g00085 369 CDD STKc_MAP3K-like 85 340 - -
Sebi93g00085 369 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 39 344 - -
Sebi93g00085 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Sebi93g00085 369 SMART serkin_6 79 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi93g00085 Sebi-Chr93 1216021 1217959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi93g00085 11 369 MAP Kinase Kinase Kinase AT3G22750 69.947 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sebi93g00085 PK_Tyr_Ser-Thr 1e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi93g00085 - - gmx:100803917 592.808