Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi93g00018 ATGGACCCTTCGCCGGAATTGCCGACAAGATTGGCTCCGCCATTCGCAAATCGCGAATCGGCCTCAAGCCTCTTCCTCCGCCGCCCATACGGTGGCCGCAAGGGCGAATTAATCGGTTCTGGTGCCTTTGGTCGCGTCTACATGGGCATGAACCTTGATTCCGGGGAGCTTATTGCTGTCAAACAAGTTTTGATTGCGCCTGGTACCGCTTCCAAGGAGAATACGCAGGCTAATATTCGGGAGCTCGAAGAAGAAGTGAAGCTCCTCAAGAATCTTAAGCATCCGAATATTGTAAGGTACTTGGGGACTGCTAGAGAGGAGGATTCCTTAAATATTCTGCTGGAGTTTGTACCTGGTGGATCTATCTCATCACTTTTGGGGAAATTCGGATCCTTCCCTGAGTCCATTTTACTTGGCCTTGAATACCTTCACAATAACGGAATTATTCACAGGGATATTAAGGGCGCAAACATTCTAGTTGATAACAAAGGGTGCATTAAACTTGCAGACTTTGGTGCATCCAAGAAAGTTGTTGAATTGGCTACCATAAATGGTGCAAAGTCAATAAAGGGTACCCCACACTGGATGTCACCTGAAGTTATTTTACAGACAGGACATACAATTTCTACTGATATATGGAGTATTGCATGCACTGTGATAGAGATGGCCACAGGAAAGCCTCCGTGGAGTCAACAGTATCCCCAGGAGGTTTCGGCTCTTTTCTACATTGGGACAACTAAATCTCATCCACCCATACCTGAGCATCTGTCTGATGAGGCAAAGGACTTTTTGCTGAAATGCTTCCATAGGGAACCAAATTTAAGACCTTCTGCATCAGACTTGTTACTGCATCCATTCATCACCTGTGAGTATCAGGATTCTCGTTCAATATTACGTAGTACAATCAGGGACTCTTGCAATCAGATGGCAACATATGGGATGAACTCTAGAAACTTTTTGGATTCTGTCCAGGGATCAACCTGCACGGGCCTAAAGGATGTCTGTCGGATAGATAGTGTAAGGTTCTCGAGTGTATATCATGCAAATCTTCCAAGAGCAGGTTACTACCAGGGAGCAGACAACTATGATGATGACATGTGTCAGATAGATGATAAAGATGATTTTTTGGTTGCTTCATCAGTAAAATCTAAATCACTATTTGCTGCTGATGATATAAAGAGTTTCAATCCTATGTGCGAACCTGTGGATGACTGGCCTTGCAAGTTTGATGAAACTCAAAATTTGGAGAAAAGTAGAGTGGACTTGTCTCCAGATCAAACTATTAGGAAAACCATGAGGAGTCATGAACCATCTAGTAAAGTGGAGAATGATTTCTCATTCTCAAGCGAGCCTCTTGGAGTTGAAGATGATGATGAAGTCACTGAGTCCAAAATAAGAGCTTTCCTGGATGATAAGGCCTTTGAACTGAAGAAGCTCCAAACACCACTTTATGAAGAATTCTTTAGCATATCAAATGCAGCAATTGCTCCTGCTCCTGCACCTGTTGCAATTGCACAGAGTAAAGTCATTTCGGATGTGTCAACTGTAACATCAAAAGGCAGGTCTCCTGGTCAAGCTAGAAGACGGTTCTCAATGGCTGGGAGTGCCAGTGTAGCAAGCCCTGGGAGCCATAGCAAATATCGATCAAAGCTTAGTGGTGCTTACAGTCGGCCTTTGCAGGAAATTCAGTCATCTGAGCTTAATGAATCAAAGGAGACTCTTCATGATGCTGAGCTGGGGACATTTAGTGTTAGCTCAAGCTTCTCTGAGAGACAGAGAAAATGGAAAGAAGAACTTGTTGAAGAGCTTCAGTGGAAGCGAGGCAAGTTTTATGTTTTCTCTGACAATTAG 1851 0.4381 MDPSPELPTRLAPPFANRESASSLFLRRPYGGRKGELIGSGAFGRVYMGMNLDSGELIAVKQVLIAPGTASKENTQANIRELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESILLGLEYLHNNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSIKGTPHWMSPEVILQTGHTISTDIWSIACTVIEMATGKPPWSQQYPQEVSALFYIGTTKSHPPIPEHLSDEAKDFLLKCFHREPNLRPSASDLLLHPFITCEYQDSRSILRSTIRDSCNQMATYGMNSRNFLDSVQGSTCTGLKDVCRIDSVRFSSVYHANLPRAGYYQGADNYDDDMCQIDDKDDFLVASSVKSKSLFAADDIKSFNPMCEPVDDWPCKFDETQNLEKSRVDLSPDQTIRKTMRSHEPSSKVENDFSFSSEPLGVEDDDEVTESKIRAFLDDKAFELKKLQTPLYEEFFSISNAAIAPAPAPVAIAQSKVISDVSTVTSKGRSPGQARRRFSMAGSASVASPGSHSKYRSKLSGAYSRPLQEIQSSELNESKETLHDAELGTFSVSSSFSERQRKWKEELVEELQWKRGKFYVFSDN 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi93g00018 616 ProSiteProfiles Protein kinase domain profile. 32 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi93g00018 616 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 33 299 - -
Sebi93g00018 616 Gene3D Transferase(Phosphotransferase) domain 1 33 319 - -
Sebi93g00018 616 MobiDBLite consensus disorder prediction 432 456 - -
Sebi93g00018 616 Coils Coil 72 92 - -
Sebi93g00018 616 SMART serkin_6 32 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi93g00018 616 SUPERFAMILY Protein kinase-like (PK-like) 34 308 IPR011009 -
Sebi93g00018 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Sebi93g00018 616 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Sebi93g00018 616 Pfam Protein kinase domain 34 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi93g00018 616 FunFam Mitogen-activated protein kinase kinase kinase 2 31 315 - -
Sebi93g00018 616 CDD STKc_MAPKKK 33 287 - -
Sebi93g00018 616 MobiDBLite consensus disorder prediction 513 554 - -
Sebi93g00018 616 MobiDBLite consensus disorder prediction 536 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi93g00018 Sebi-Chr93 192900 198228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi93g00018 33 595 MAP Kinase Kinase Kinase AT3G06030 54.355 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sebi93g00018 Pkinase 4.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi93g00018 K20606 - gmx:100786810 879.782