Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi93g00014 ATGTCATCTAACAAGAATTCTGCAGAGAATGAGTCGAGAAGGAACAAAGGGAAAGAAGTTGCGAGTGACAGCGTGGAAGTTCCTCCTGCCGTTGACGTTGACGAGGCCCAAGAGGATCATGATTCAAGCAAGAGGAAGCAGTACCACCGCCACTCTCAGCACCAGATACAACAGATGGAAATGTTCTTCAAGGAGTGCCCTCACCCAGATGACAAGCAAAGGAAAGCCTTGGGCGATGAGCTCGGGCTTGACCCTTTGAAAATCAAGTTTTGGTTCCAAAACAAGCGTACCCAAGTGAAGGCTCAACAAGAACGCCATGAGAATGCTCTTCTAAAGGGTGAGAATGAAAAGCTTCGTGCTGACAATGTTAGATACAAGGAGGCACTGAGTCACGCTACATGCCCTACCTGTGGAGGTCCCTCTGTTGGTGAAATGATGTCAGGAATGACAGCGAAAATGATGGGAAAGTCTGTGACAGCGCTCTCTTACAATCATATGCCTTCGTGCACGCTTGATCTTGGGGGTGGTACCCACGGAGCAGAGTCATCAATAGGGGAAATGTATGGCAGTGGTATGATGATGTCACTCCTTGTTCCTACGGAAGCTGAGAAAATCTTGATTGTGGACCTTGCTGTTTCCGGAATGGAGGAATTGATAAGCTTGGCTGCCTCTAGTGAGCCTTTATGGGTCGTGAGCAACCTTGGTTTTGAAATTCTCAATGAAAGTGAATACTCAAGGACTTTCCATGGGGGAACGAGTCCAAAGCCTTTGGGGTATAAAACGGAAGCTTCAAGGGATTCTGTGGTGGTTATCATGAATCATATGAACCTCGTTGAGATCCTTATGAATGTGCTGGCGGAGAGAATGATATTTAACTTCTGTACTTGTGTTGGTTCTTCTACATCACATCACCCAACTGGTTGTGATGATGTAAGGATCATGACCAGAAAGAACAACGGTGAACCTGGCAGACCTGCTGGTATTGTTCTCAGTGCTGCAACCTCTTTCTGGCTTCCAATTCAGCCAAAGAAGTGTTTTGAGTTCCTTCGAAATGAAAACTCAAGGCACGAGTGGGATATTCTCTCCAACGGGATTGTAGTTCAAGAACTGGCACACATAACAAATGGTCGTCATCCTGGAAATTGTTTATCTTTGTTTCGAGTCAATGGTGCAAGTGAGAACCAAAGTAATATGCTTATGCTTCAAGAGAGCTTCAGCGATCCTACAGGGTCGTACGTGGTTTATGCTCCAACTGATCTTATTGCTGTGAATGTTGTGCTGAGTGGGGGTGATCCAGATTATGTCGCCCTGCTACCCTCAGGCTTTGTTATTCTTCCTGATGGGCCTATTGTTGATATTGGAACTGGAACAGTTGCATTTCAGATATTGGTTGATACACTTCCAACAGCCAAACTATCTCTTGGTTCTGTCACCACTGGTAGCACTTTGTTGAAGTGCACAGTTGAACGGATAAAAGCTGCAGTTAAGTTCACACAACAACATAACCGTATAGCCGTCAAATAG 1524 0.4547 MSSNKNSAENESRRNKGKEVASDSVEVPPAVDVDEAQEDHDSSKRKQYHRHSQHQIQQMEMFFKECPHPDDKQRKALGDELGLDPLKIKFWFQNKRTQVKAQQERHENALLKGENEKLRADNVRYKEALSHATCPTCGGPSVGEMMSGMTAKMMGKSVTALSYNHMPSCTLDLGGGTHGAESSIGEMYGSGMMMSLLVPTEAEKILIVDLAVSGMEELISLAASSEPLWVVSNLGFEILNESEYSRTFHGGTSPKPLGYKTEASRDSVVVIMNHMNLVEILMNVLAERMIFNFCTCVGSSTSHHPTGCDDVRIMTRKNNGEPGRPAGIVLSAATSFWLPIQPKKCFEFLRNENSRHEWDILSNGIVVQELAHITNGRHPGNCLSLFRVNGASENQSNMLMLQESFSDPTGSYVVYAPTDLIAVNVVLSGGDPDYVALLPSGFVILPDGPIVDIGTGTVAFQILVDTLPTAKLSLGSVTTGSTLLKCTVERIKAAVKFTQQHNRIAVK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi93g00014 507 ProSiteProfiles START domain profile. 200 373 IPR002913 GO:0008289
Sebi93g00014 507 FunFam Homeobox-leucine zipper protein HDG1 32 118 - -
Sebi93g00014 507 Pfam Homeodomain 45 100 IPR001356 GO:0003677
Sebi93g00014 507 Pfam START domain 212 288 IPR002913 GO:0008289
Sebi93g00014 507 SUPERFAMILY Bet v1-like 286 449 - -
Sebi93g00014 507 ProSiteProfiles 'Homeobox' domain profile. 42 102 IPR001356 GO:0003677
Sebi93g00014 507 SMART HOX_1 44 106 IPR001356 GO:0003677
Sebi93g00014 507 SUPERFAMILY Homeodomain-like 39 106 IPR009057 -
Sebi93g00014 507 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 285 495 IPR042160 -
Sebi93g00014 507 Gene3D - 32 116 - -
Sebi93g00014 507 MobiDBLite consensus disorder prediction 1 55 - -
Sebi93g00014 507 Coils Coil 101 128 - -
Sebi93g00014 507 CDD homeodomain 45 103 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi93g00014 Sebi-Chr93 145955 148361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi93g00014 285 495 Homeobox Transcription Factor Family AT4G04890 63.025 1.21e-95 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sebi93g00014 START 1.2e-06 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi93g00014 K09338 - jre:108990742 315.849