Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi93g00012 ATGCAGATGACGATTTACTCATCATTTGCCAGATTTGTGCAGAAGCCAAAGAGACTAATGAGATGTTCAGTAACCAGAGATGTGGCCATTCCTTCTGCTATGACTGTGGATTGTTCTGCTATGATGCTGGATGACATTGAAGGGCAAGATATTAAGGAGTCTGAGTGCCCCTTTTGCCATAGACTCTTTTGTGCAAGGTGTCATGTTCCTTGGCATCCCGGGGTTCCCTGTGAAGAGTTCCAGAAACTGAATGAGGATGAGAGAGGGAAGGAAGATCTTGTTGTTAGAGAGCTTGCTCATGAAAAGAAATGGAGTAGCAGGTGTCCCAAATGCAAGTTCAATGTGGAAAACACTGAAGGGTATTTGCACATGATCTGCGGTGCGACTTTCACTTTTGCTATGCGTGTGGAAAAGAATGCACTTCTGCTCATGGTGGCTGCCAGAGAAATTAGCTAG 456 0.4496 MQMTIYSSFARFVQKPKRLMRCSVTRDVAIPSAMTVDCSAMMLDDIEGQDIKESECPFCHRLFCARCHVPWHPGVPCEEFQKLNEDERGKEDLVVRELAHEKKWSSRCPKCKFNVENTEGYLHMICGATFTFAMRVEKNALLLMVAAREIS 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi93g00012 151 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 37 130 IPR031127 GO:0004842|GO:0016567
Sebi93g00012 151 CDD BRcat_RBR_unk 37 80 - -
Sebi93g00012 151 Gene3D - 75 134 - -
Sebi93g00012 151 Pfam IBR domain, a half RING-finger domain 35 77 IPR002867 GO:0008270
Sebi93g00012 151 SUPERFAMILY RING/U-box 50 82 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi93g00012 55 126 C3H Transcription Factor Family AT2G19610 30.556 4.13e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi93g00012 K11975 - mtr:25485239 172.555